Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 Z97180.1-201ENST00000445173 988 ntBASIC16.53■□□□□ 0.24
TRIM50Q86XT4 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 NUP210P1-202ENST00000504322 710 ntBASIC16.53■□□□□ 0.24
TRIM50Q86XT4 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 AC079328.1-201ENST00000560358 952 ntBASIC16.53■□□□□ 0.24
TRIM50Q86XT4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 SNORD3B-2-202ENST00000571722 791 ntBASIC16.53■□□□□ 0.24
TRIM50Q86XT4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 AC015967.2-201ENST00000624092 234 ntBASIC16.53■□□□□ 0.24
TRIM50Q86XT4 AC006435.4-201ENST00000625037 234 ntBASIC16.53■□□□□ 0.24
TRIM50Q86XT4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 AL356737.1-201ENST00000634391 234 ntBASIC16.53■□□□□ 0.24
TRIM50Q86XT4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM50Q86XT4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 PUDPP3-201ENST00000445368 636 ntBASIC16.52■□□□□ 0.24
TRIM50Q86XT4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 HLA-J-204ENST00000495278 958 ntBASIC16.52■□□□□ 0.24
TRIM50Q86XT4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 ALG3P1-201ENST00000508806 1114 ntBASIC16.52■□□□□ 0.24
TRIM50Q86XT4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 AC016629.1-201ENST00000596579 586 ntBASIC16.52■□□□□ 0.24
TRIM50Q86XT4 AC008825.2-201ENST00000603374 718 ntBASIC16.52■□□□□ 0.24
TRIM50Q86XT4 AF254983.2-201ENST00000612331 135 ntBASIC16.52■□□□□ 0.24
TRIM50Q86XT4 AC244517.3-201ENST00000616254 1235 ntBASIC16.52■□□□□ 0.24
TRIM50Q86XT4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM50Q86XT4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM50Q86XT4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM50Q86XT4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.52■□□□□ 0.23
TRIM50Q86XT4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.52■□□□□ 0.23
TRIM50Q86XT4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM50Q86XT4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.52■□□□□ 0.23
TRIM50Q86XT4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM50Q86XT4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM50Q86XT4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM50Q86XT4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms