Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 AC104457.1-201ENST00000401024 814 ntBASIC12.41□□□□□ -0.42
ZNF546Q86UE3 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 AC131902.2-201ENST00000566892 2172 ntBASIC12.41□□□□□ -0.42
ZNF546Q86UE3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 AC072061.1-201ENST00000569710 2234 ntBASIC12.41□□□□□ -0.42
ZNF546Q86UE3 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.41□□□□□ -0.42
ZNF546Q86UE3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 AC098831.1-202ENST00000438821 336 ntBASIC12.4□□□□□ -0.42
ZNF546Q86UE3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
ZNF546Q86UE3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms