Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 AC092933.1-201ENST00000393644 945 ntBASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 MESTP3-201ENST00000503460 968 ntBASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 USP32P1-208ENST00000506594 1164 ntBASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 AC068587.3-201ENST00000526613 355 ntBASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 AC027307.3-201ENST00000594262 1100 ntBASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 AC113367.3-201ENST00000508316 1912 ntBASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NHLRC1Q6VVB1 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
NHLRC1Q6VVB1 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 RN7SKP230-201ENST00000365642 335 ntBASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 NME2P1-201ENST00000426182 414 ntBASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 RN7SL752P-201ENST00000463779 287 ntBASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 RN7SL692P-201ENST00000464677 288 ntBASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 SLC25A47P1-201ENST00000531577 414 ntBASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 TDH-203ENST00000531764 1110 ntBASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 PTP4A1P2-201ENST00000546033 454 ntBASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NHLRC1Q6VVB1 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms