Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 AC026954.1-201ENST00000429771 1293 ntBASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 FTLP10-202ENST00000505798 471 ntBASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 DUX4L45-201ENST00000566406 1057 ntBASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 BX640514.1-201ENST00000583223 1918 ntBASIC15.53■□□□□ 0.08
TTC39BQ5VTQ0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 MTHFR-210ENST00000641407 2387 ntBASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 MESTP3-201ENST00000503460 968 ntBASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 AC138466.3-201ENST00000619983 221 ntBASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TTC39BQ5VTQ0 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TTC39BQ5VTQ0 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TTC39BQ5VTQ0 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TTC39BQ5VTQ0 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TTC39BQ5VTQ0 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TTC39BQ5VTQ0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TTC39BQ5VTQ0 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TTC39BQ5VTQ0 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.52■□□□□ 0.07
TTC39BQ5VTQ0 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.52■□□□□ 0.07
TTC39BQ5VTQ0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.52■□□□□ 0.07
TTC39BQ5VTQ0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TTC39BQ5VTQ0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.52■□□□□ 0.07
TTC39BQ5VTQ0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.52■□□□□ 0.07
TTC39BQ5VTQ0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 FAM8A4P-201ENST00000435433 1213 ntBASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TTC39BQ5VTQ0 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms