Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 NAA40-205ENST00000539656 577 ntTSL 4 BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 AP001527.2-201ENST00000614441 631 ntBASIC18.31■□□□□ 0.52
RC3H1Q5TC82 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 LAP3P2-201ENST00000454686 1454 ntBASIC18.31■□□□□ 0.52
RC3H1Q5TC82 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
RC3H1Q5TC82 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 RNVU1-8-201ENST00000364272 125 ntBASIC18.3■□□□□ 0.52
RC3H1Q5TC82 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 ACTG1P19-201ENST00000418987 1116 ntBASIC18.3■□□□□ 0.52
RC3H1Q5TC82 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 RN7SL767P-201ENST00000493013 295 ntBASIC18.3■□□□□ 0.52
RC3H1Q5TC82 AC095040.1-201ENST00000513286 675 ntBASIC18.3■□□□□ 0.52
RC3H1Q5TC82 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 AL118522.1-201ENST00000611368 560 ntBASIC18.3■□□□□ 0.52
RC3H1Q5TC82 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RC3H1Q5TC82 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 COX20P1-201ENST00000366529 357 ntBASIC18.29■□□□□ 0.52
RC3H1Q5TC82 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 HINT1-205ENST00000508488 703 ntTSL 2 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 MIR6746-201ENST00000620971 63 ntBASIC18.29■□□□□ 0.52
RC3H1Q5TC82 ST5-261ENST00000626808 1071 ntTSL 5 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RC3H1Q5TC82 AL591122.2-201ENST00000624125 1853 ntBASIC18.29■□□□□ 0.52
RC3H1Q5TC82 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.28■□□□□ 0.52
RC3H1Q5TC82 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RC3H1Q5TC82 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms