Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC099568.2-201ENST00000609194 695 ntBASIC12.96□□□□□ -0.33
UBA52P62987 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.96□□□□□ -0.33
UBA52P62987 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.96□□□□□ -0.33
UBA52P62987 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.96□□□□□ -0.33
UBA52P62987 AC004461.2-201ENST00000629517 803 ntBASIC12.96□□□□□ -0.33
UBA52P62987 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.96□□□□□ -0.33
UBA52P62987 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBA52P62987 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBA52P62987 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBA52P62987 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBA52P62987 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBA52P62987 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.96□□□□□ -0.33
UBA52P62987 AL589702.1-201ENST00000641229 1509 ntBASIC12.96□□□□□ -0.33
UBA52P62987 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UBA52P62987 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBA52P62987 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.96□□□□□ -0.34
UBA52P62987 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBA52P62987 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBA52P62987 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.96□□□□□ -0.34
UBA52P62987 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
UBA52P62987 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.96□□□□□ -0.34
UBA52P62987 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBA52P62987 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.96□□□□□ -0.34
UBA52P62987 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.96□□□□□ -0.34
UBA52P62987 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBA52P62987 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UBA52P62987 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UBA52P62987 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBA52P62987 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBA52P62987 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBA52P62987 WASH3P-207ENST00000560956 1394 ntBASIC12.95□□□□□ -0.34
UBA52P62987 AC097359.2-201ENST00000604992 2389 ntBASIC12.95□□□□□ -0.34
UBA52P62987 AL591122.2-201ENST00000624125 1853 ntBASIC12.95□□□□□ -0.34
UBA52P62987 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UBA52P62987 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.95□□□□□ -0.34
UBA52P62987 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.95□□□□□ -0.34
UBA52P62987 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBA52P62987 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UBA52P62987 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UBA52P62987 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UBA52P62987 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.95□□□□□ -0.34
UBA52P62987 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.95□□□□□ -0.34
UBA52P62987 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBA52P62987 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBA52P62987 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBA52P62987 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.95□□□□□ -0.34
UBA52P62987 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.95□□□□□ -0.34
UBA52P62987 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBA52P62987 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UBA52P62987 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBA52P62987 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.95□□□□□ -0.34
UBA52P62987 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBA52P62987 AC123567.1-201ENST00000548294 1261 ntBASIC12.95□□□□□ -0.34
UBA52P62987 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBA52P62987 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.95□□□□□ -0.34
UBA52P62987 AL109936.8-201ENST00000641772 604 ntBASIC12.95□□□□□ -0.34
UBA52P62987 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
UBA52P62987 AL031595.1-201ENST00000623969 4709 ntBASIC12.95□□□□□ -0.34
UBA52P62987 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBA52P62987 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
UBA52P62987 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
UBA52P62987 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBA52P62987 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBA52P62987 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBA52P62987 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.95□□□□□ -0.34
UBA52P62987 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBA52P62987 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
UBA52P62987 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBA52P62987 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBA52P62987 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBA52P62987 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBA52P62987 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
UBA52P62987 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.95□□□□□ -0.34
UBA52P62987 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
UBA52P62987 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
UBA52P62987 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.94□□□□□ -0.34
UBA52P62987 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.94□□□□□ -0.34
UBA52P62987 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
UBA52P62987 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
UBA52P62987 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.94□□□□□ -0.34
UBA52P62987 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBA52P62987 AC022210.1-201ENST00000449856 793 ntBASIC12.94□□□□□ -0.34
UBA52P62987 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms