Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC19.37■□□□□ 0.69
RIPK4P57078 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RIPK4P57078 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RIPK4P57078 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC19.37■□□□□ 0.69
RIPK4P57078 AMT-239ENST00000636865 1914 ntTSL 5 BASIC19.37■□□□□ 0.69
RIPK4P57078 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RIPK4P57078 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RIPK4P57078 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC19.36■□□□□ 0.69
RIPK4P57078 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RIPK4P57078 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.36■□□□□ 0.69
RIPK4P57078 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RIPK4P57078 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RIPK4P57078 AL035414.1-201ENST00000451327 857 ntBASIC19.36■□□□□ 0.69
RIPK4P57078 AC126915.1-201ENST00000522847 1038 ntBASIC19.36■□□□□ 0.69
RIPK4P57078 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC19.36■□□□□ 0.69
RIPK4P57078 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RIPK4P57078 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC19.36■□□□□ 0.69
RIPK4P57078 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RIPK4P57078 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RIPK4P57078 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 FES-203ENST00000394302 2133 ntTSL 5 BASIC19.36■□□□□ 0.69
RIPK4P57078 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RIPK4P57078 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RIPK4P57078 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
RIPK4P57078 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
RIPK4P57078 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.35■□□□□ 0.69
RIPK4P57078 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
RIPK4P57078 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
RIPK4P57078 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 R3HDM2P2-201ENST00000401880 2116 ntBASIC19.35■□□□□ 0.69
RIPK4P57078 AC004898.1-201ENST00000451057 766 ntBASIC19.35■□□□□ 0.69
RIPK4P57078 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 AC005324.6-201ENST00000587972 613 ntBASIC19.35■□□□□ 0.69
RIPK4P57078 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RIPK4P57078 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC19.35■□□□□ 0.69
RIPK4P57078 MIR6720-201ENST00000611664 98 ntBASIC19.35■□□□□ 0.69
RIPK4P57078 Z98259.2-201ENST00000641583 609 ntBASIC19.35■□□□□ 0.69
RIPK4P57078 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
RIPK4P57078 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC19.35■□□□□ 0.69
RIPK4P57078 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC19.35■□□□□ 0.69
RIPK4P57078 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RIPK4P57078 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RIPK4P57078 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC19.35■□□□□ 0.69
RIPK4P57078 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RIPK4P57078 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK4P57078 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK4P57078 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK4P57078 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RIPK4P57078 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK4P57078 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms