Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN8P56748 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.16□□□□□ -0.14
CLDN8P56748 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLDN8P56748 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.16□□□□□ -0.14
CLDN8P56748 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN8P56748 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN8P56748 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CLDN8P56748 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLDN8P56748 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLDN8P56748 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN8P56748 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN8P56748 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN8P56748 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CLDN8P56748 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN8P56748 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
CLDN8P56748 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLDN8P56748 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
CLDN8P56748 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CLDN8P56748 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.15□□□□□ -0.14
CLDN8P56748 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN8P56748 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CLDN8P56748 RN7SKP230-201ENST00000365642 335 ntBASIC14.15□□□□□ -0.14
CLDN8P56748 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.15□□□□□ -0.14
CLDN8P56748 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CLDN8P56748 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.15□□□□□ -0.14
CLDN8P56748 UGT1A2P-201ENST00000454886 866 ntBASIC14.15□□□□□ -0.14
CLDN8P56748 GCOM2-201ENST00000509133 1104 ntBASIC14.15□□□□□ -0.14
CLDN8P56748 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.15□□□□□ -0.14
CLDN8P56748 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
CLDN8P56748 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.15□□□□□ -0.14
CLDN8P56748 CHCHD2P3-201ENST00000603038 451 ntBASIC14.15□□□□□ -0.14
CLDN8P56748 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLDN8P56748 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLDN8P56748 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN8P56748 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN8P56748 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN8P56748 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN8P56748 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN8P56748 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN8P56748 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN8P56748 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN8P56748 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN8P56748 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN8P56748 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CLDN8P56748 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CLDN8P56748 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CLDN8P56748 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN8P56748 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN8P56748 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN8P56748 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CLDN8P56748 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN8P56748 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN8P56748 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CLDN8P56748 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CLDN8P56748 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CLDN8P56748 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN8P56748 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN8P56748 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CLDN8P56748 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN8P56748 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN8P56748 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN8P56748 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CLDN8P56748 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN8P56748 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN8P56748 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN8P56748 AC103988.2-201ENST00000561804 725 ntBASIC14.14□□□□□ -0.15
CLDN8P56748 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN8P56748 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN8P56748 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN8P56748 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
CLDN8P56748 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.14□□□□□ -0.15
CLDN8P56748 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.14□□□□□ -0.15
CLDN8P56748 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN8P56748 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN8P56748 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN8P56748 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN8P56748 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLDN8P56748 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms