Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRPF1P55201 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRPF1P55201 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRPF1P55201 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC18.86■□□□□ 0.61
BRPF1P55201 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC18.86■□□□□ 0.61
BRPF1P55201 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
BRPF1P55201 SHC1P1-201ENST00000425230 1745 ntBASIC18.86■□□□□ 0.61
BRPF1P55201 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 AC015688.4-201ENST00000580780 1647 ntBASIC18.86■□□□□ 0.61
BRPF1P55201 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 KRT8P4-201ENST00000509735 1454 ntBASIC18.86■□□□□ 0.61
BRPF1P55201 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 HINT2P1-201ENST00000419438 481 ntBASIC18.86■□□□□ 0.61
BRPF1P55201 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC18.86■□□□□ 0.61
BRPF1P55201 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.86■□□□□ 0.61
BRPF1P55201 HOMER2P2-201ENST00000451621 847 ntBASIC18.86■□□□□ 0.61
BRPF1P55201 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.86■□□□□ 0.61
BRPF1P55201 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC18.86■□□□□ 0.61
BRPF1P55201 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC18.86■□□□□ 0.61
BRPF1P55201 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC18.86■□□□□ 0.61
BRPF1P55201 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
BRPF1P55201 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
BRPF1P55201 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
BRPF1P55201 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRPF1P55201 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
BRPF1P55201 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
BRPF1P55201 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
BRPF1P55201 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC18.85■□□□□ 0.61
BRPF1P55201 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
BRPF1P55201 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.85■□□□□ 0.61
BRPF1P55201 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.85■□□□□ 0.61
BRPF1P55201 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
BRPF1P55201 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 AL035414.1-201ENST00000451327 857 ntBASIC18.85■□□□□ 0.61
BRPF1P55201 LDHBP1-201ENST00000455730 1119 ntBASIC18.85■□□□□ 0.61
BRPF1P55201 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.85■□□□□ 0.61
BRPF1P55201 FAM86HP-204ENST00000513466 959 ntBASIC18.85■□□□□ 0.61
BRPF1P55201 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.85■□□□□ 0.61
BRPF1P55201 AC105129.2-201ENST00000559536 390 ntBASIC18.85■□□□□ 0.61
BRPF1P55201 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC18.85■□□□□ 0.61
BRPF1P55201 AC009955.4-201ENST00000597192 544 ntBASIC18.85■□□□□ 0.61
BRPF1P55201 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 ABBA01031663.1-201ENST00000635630 790 ntBASIC18.85■□□□□ 0.61
BRPF1P55201 AC244452.3-201ENST00000636814 210 ntBASIC18.85■□□□□ 0.61
BRPF1P55201 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
BRPF1P55201 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC18.85■□□□□ 0.61
BRPF1P55201 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
BRPF1P55201 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 AL023775.1-201ENST00000454907 1746 ntBASIC18.85■□□□□ 0.61
BRPF1P55201 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC18.85■□□□□ 0.61
BRPF1P55201 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
BRPF1P55201 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.85■□□□□ 0.61
BRPF1P55201 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.85■□□□□ 0.61
BRPF1P55201 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
BRPF1P55201 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRPF1P55201 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC18.85■□□□□ 0.61
BRPF1P55201 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC18.85■□□□□ 0.61
BRPF1P55201 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRPF1P55201 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRPF1P55201 WARS-203ENST00000358655 2466 ntTSL 2 BASIC18.84■□□□□ 0.61
BRPF1P55201 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRPF1P55201 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRPF1P55201 HSPA7-201ENST00000445535 1927 ntBASIC18.84■□□□□ 0.61
BRPF1P55201 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms