Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK1P53667 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK1P53667 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.64□□□□□ -0.07
LIMK1P53667 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.64□□□□□ -0.07
LIMK1P53667 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK1P53667 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.64□□□□□ -0.07
LIMK1P53667 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LIMK1P53667 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK1P53667 KRT8P21-201ENST00000430398 1491 ntBASIC14.63□□□□□ -0.07
LIMK1P53667 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LIMK1P53667 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK1P53667 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK1P53667 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK1P53667 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.63□□□□□ -0.07
LIMK1P53667 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK1P53667 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK1P53667 FAM90A7P-201ENST00000382628 1395 ntBASIC14.63□□□□□ -0.07
LIMK1P53667 FAM90A23P-201ENST00000400136 1395 ntBASIC14.63□□□□□ -0.07
LIMK1P53667 CAP2P1-201ENST00000557743 1390 ntBASIC14.63□□□□□ -0.07
LIMK1P53667 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK1P53667 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
LIMK1P53667 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK1P53667 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK1P53667 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK1P53667 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK1P53667 RPL8P2-201ENST00000430538 502 ntBASIC14.63□□□□□ -0.07
LIMK1P53667 AC078875.1-201ENST00000431907 724 ntBASIC14.63□□□□□ -0.07
LIMK1P53667 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.63□□□□□ -0.07
LIMK1P53667 RPL18AP3-201ENST00000462885 528 ntBASIC14.63□□□□□ -0.07
LIMK1P53667 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.63□□□□□ -0.07
LIMK1P53667 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LIMK1P53667 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.63□□□□□ -0.07
LIMK1P53667 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LIMK1P53667 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC14.63□□□□□ -0.07
LIMK1P53667 DUX4L47-201ENST00000566374 394 ntBASIC14.63□□□□□ -0.07
LIMK1P53667 SAMD11P1-201ENST00000571429 661 ntBASIC14.63□□□□□ -0.07
LIMK1P53667 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK1P53667 AC087392.5-201ENST00000612517 489 ntBASIC14.63□□□□□ -0.07
LIMK1P53667 AC007718.1-201ENST00000621078 280 ntBASIC14.63□□□□□ -0.07
LIMK1P53667 AL161773.1-201ENST00000624845 863 ntBASIC14.63□□□□□ -0.07
LIMK1P53667 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK1P53667 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.63□□□□□ -0.07
LIMK1P53667 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK1P53667 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK1P53667 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.63□□□□□ -0.07
LIMK1P53667 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.63□□□□□ -0.07
LIMK1P53667 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LIMK1P53667 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.63□□□□□ -0.07
LIMK1P53667 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK1P53667 AL390755.1-201ENST00000623716 2027 ntBASIC14.63□□□□□ -0.07
LIMK1P53667 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK1P53667 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK1P53667 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK1P53667 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LIMK1P53667 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
LIMK1P53667 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
LIMK1P53667 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.62□□□□□ -0.07
LIMK1P53667 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LIMK1P53667 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.62□□□□□ -0.07
LIMK1P53667 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LIMK1P53667 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LIMK1P53667 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LIMK1P53667 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.62□□□□□ -0.07
LIMK1P53667 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LIMK1P53667 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
LIMK1P53667 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.62□□□□□ -0.07
LIMK1P53667 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC14.62□□□□□ -0.07
LIMK1P53667 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 PSMD4P1-201ENST00000433951 1109 ntBASIC14.62□□□□□ -0.07
LIMK1P53667 LYPLA2P1-203ENST00000447689 696 ntBASIC14.62□□□□□ -0.07
LIMK1P53667 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LIMK1P53667 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LIMK1P53667 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.62□□□□□ -0.07
LIMK1P53667 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
LIMK1P53667 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LIMK1P53667 AC008825.2-201ENST00000603374 718 ntBASIC14.62□□□□□ -0.07
LIMK1P53667 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LIMK1P53667 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
LIMK1P53667 AC105137.3-201ENST00000617588 984 ntBASIC14.62□□□□□ -0.07
LIMK1P53667 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LIMK1P53667 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LIMK1P53667 CICP4-201ENST00000447359 2812 ntBASIC14.62□□□□□ -0.07
LIMK1P53667 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
LIMK1P53667 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms