Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
HMGA2P52926 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.55□□□□□ -0.24
HMGA2P52926 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
HMGA2P52926 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
HMGA2P52926 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
HMGA2P52926 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 AC015909.5-201ENST00000624336 2266 ntBASIC13.55□□□□□ -0.24
HMGA2P52926 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HMGA2P52926 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HMGA2P52926 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.54□□□□□ -0.24
HMGA2P52926 AGAP10P-201ENST00000454844 2418 ntBASIC13.54□□□□□ -0.24
HMGA2P52926 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.54□□□□□ -0.24
HMGA2P52926 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.54□□□□□ -0.24
HMGA2P52926 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.54□□□□□ -0.24
HMGA2P52926 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.54□□□□□ -0.24
HMGA2P52926 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
HMGA2P52926 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.54□□□□□ -0.24
HMGA2P52926 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HMGA2P52926 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 ACKR1-201ENST00000368121 1240 ntBASIC13.54□□□□□ -0.24
HMGA2P52926 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
HMGA2P52926 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.54□□□□□ -0.24
HMGA2P52926 C1QBPP1-201ENST00000400117 770 ntBASIC13.54□□□□□ -0.24
HMGA2P52926 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.54□□□□□ -0.24
HMGA2P52926 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.54□□□□□ -0.24
HMGA2P52926 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.54□□□□□ -0.24
HMGA2P52926 FAM86GP-201ENST00000448322 971 ntBASIC13.54□□□□□ -0.24
HMGA2P52926 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.54□□□□□ -0.24
HMGA2P52926 ALG3P1-201ENST00000508806 1114 ntBASIC13.54□□□□□ -0.24
HMGA2P52926 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.54□□□□□ -0.24
HMGA2P52926 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.54□□□□□ -0.24
HMGA2P52926 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.54□□□□□ -0.24
HMGA2P52926 AC124283.3-201ENST00000570869 594 ntBASIC13.54□□□□□ -0.24
HMGA2P52926 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HMGA2P52926 AC004466.1-201ENST00000599515 1080 ntBASIC13.54□□□□□ -0.24
HMGA2P52926 AC099568.2-201ENST00000609194 695 ntBASIC13.54□□□□□ -0.24
HMGA2P52926 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.54□□□□□ -0.24
HMGA2P52926 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HMGA2P52926 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 TUBB8P4-201ENST00000511806 1324 ntBASIC13.54□□□□□ -0.24
HMGA2P52926 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HMGA2P52926 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.54□□□□□ -0.24
HMGA2P52926 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMGA2P52926 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
HMGA2P52926 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
HMGA2P52926 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.54□□□□□ -0.24
HMGA2P52926 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
HMGA2P52926 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.53□□□□□ -0.24
HMGA2P52926 AL157996.1-201ENST00000624684 2299 ntBASIC13.53□□□□□ -0.24
HMGA2P52926 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.53□□□□□ -0.24
HMGA2P52926 AC126755.1-201ENST00000525846 6405 ntBASIC13.53□□□□□ -0.24
HMGA2P52926 AC067750.1-201ENST00000608826 6545 ntBASIC13.53□□□□□ -0.24
HMGA2P52926 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
HMGA2P52926 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HMGA2P52926 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HMGA2P52926 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.53□□□□□ -0.24
HMGA2P52926 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HMGA2P52926 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMGA2P52926 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms