Protein–RNA interactions for Protein: P51858

HDGF, Hepatoma-derived growth factor, humanhuman

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP51858 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDGFP51858 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDGFP51858 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HDGFP51858 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HDGFP51858 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
HDGFP51858 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HDGFP51858 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HDGFP51858 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HDGFP51858 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
HDGFP51858 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HDGFP51858 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC20.65■□□□□ 0.9
HDGFP51858 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HDGFP51858 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC20.65■□□□□ 0.9
HDGFP51858 FAU-202ENST00000434372 533 ntTSL 2 BASIC20.65■□□□□ 0.9
HDGFP51858 GNG10P1-201ENST00000452289 199 ntBASIC20.65■□□□□ 0.9
HDGFP51858 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC20.65■□□□□ 0.9
HDGFP51858 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC20.65■□□□□ 0.9
HDGFP51858 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC20.65■□□□□ 0.9
HDGFP51858 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC20.65■□□□□ 0.9
HDGFP51858 LINC00244-201ENST00000625073 613 ntBASIC20.65■□□□□ 0.9
HDGFP51858 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.65■□□□□ 0.9
HDGFP51858 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
HDGFP51858 AC068587.6-202ENST00000641839 5619 ntBASIC20.65■□□□□ 0.9
HDGFP51858 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HDGFP51858 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HDGFP51858 PCDHGB8P-201ENST00000502926 1973 ntBASIC20.65■□□□□ 0.9
HDGFP51858 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
HDGFP51858 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HDGFP51858 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HDGFP51858 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HDGFP51858 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HDGFP51858 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
HDGFP51858 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC20.64■□□□□ 0.9
HDGFP51858 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC20.64■□□□□ 0.9
HDGFP51858 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
HDGFP51858 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
HDGFP51858 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
HDGFP51858 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HDGFP51858 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HDGFP51858 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HDGFP51858 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HDGFP51858 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HDGFP51858 OR8T1P-201ENST00000421347 918 ntBASIC20.64■□□□□ 0.89
HDGFP51858 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC20.64■□□□□ 0.89
HDGFP51858 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC20.64■□□□□ 0.89
HDGFP51858 SCARNA12-201ENST00000459155 270 ntBASIC20.64■□□□□ 0.89
HDGFP51858 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC20.64■□□□□ 0.89
HDGFP51858 AC093909.3-201ENST00000504783 336 ntBASIC20.64■□□□□ 0.89
HDGFP51858 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HDGFP51858 AL365203.3-201ENST00000609742 2057 ntBASIC20.64■□□□□ 0.89
HDGFP51858 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HDGFP51858 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HDGFP51858 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HDGFP51858 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HDGFP51858 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HDGFP51858 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HDGFP51858 TMBIM7P-203ENST00000641617 1718 ntBASIC20.64■□□□□ 0.89
HDGFP51858 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HDGFP51858 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC20.64■□□□□ 0.89
HDGFP51858 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HDGFP51858 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC20.64■□□□□ 0.89
HDGFP51858 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HDGFP51858 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HDGFP51858 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC20.63■□□□□ 0.89
HDGFP51858 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HDGFP51858 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HDGFP51858 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC20.63■□□□□ 0.89
HDGFP51858 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HDGFP51858 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HDGFP51858 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC20.63■□□□□ 0.89
HDGFP51858 BRD7P5-201ENST00000299197 1822 ntBASIC20.63■□□□□ 0.89
HDGFP51858 PYY2-201ENST00000315776 282 ntBASIC20.63■□□□□ 0.89
HDGFP51858 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC20.63■□□□□ 0.89
HDGFP51858 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HDGFP51858 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC20.63■□□□□ 0.89
HDGFP51858 HINT1-205ENST00000508488 703 ntTSL 2 BASIC20.63■□□□□ 0.89
HDGFP51858 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
HDGFP51858 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC20.63■□□□□ 0.89
HDGFP51858 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms