Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
CCR9P51686 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCR9P51686 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.16□□□□□ -0.3
CCR9P51686 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CCR9P51686 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.15□□□□□ -0.3
CCR9P51686 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.15□□□□□ -0.3
CCR9P51686 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CCR9P51686 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.15□□□□□ -0.3
CCR9P51686 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
CCR9P51686 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CCR9P51686 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CCR9P51686 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
CCR9P51686 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.15□□□□□ -0.3
CCR9P51686 INE2-201ENST00000630399 1874 ntBASIC13.15□□□□□ -0.3
CCR9P51686 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.15□□□□□ -0.3
CCR9P51686 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.15□□□□□ -0.3
CCR9P51686 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.15□□□□□ -0.3
CCR9P51686 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CCR9P51686 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.15□□□□□ -0.3
CCR9P51686 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.15□□□□□ -0.3
CCR9P51686 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.15□□□□□ -0.3
CCR9P51686 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.15□□□□□ -0.3
CCR9P51686 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.15□□□□□ -0.3
CCR9P51686 AC009477.1-201ENST00000452936 217 ntBASIC13.15□□□□□ -0.3
CCR9P51686 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 FAM86LP-201ENST00000478302 853 ntBASIC13.15□□□□□ -0.3
CCR9P51686 AC097493.3-201ENST00000509725 367 ntBASIC13.15□□□□□ -0.3
CCR9P51686 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.15□□□□□ -0.3
CCR9P51686 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.15□□□□□ -0.3
CCR9P51686 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CCR9P51686 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 RARRES2P5-201ENST00000564013 466 ntBASIC13.15□□□□□ -0.3
CCR9P51686 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CCR9P51686 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.15□□□□□ -0.3
CCR9P51686 AC036164.1-201ENST00000570544 333 ntBASIC13.15□□□□□ -0.3
CCR9P51686 AC134684.3-201ENST00000641758 218 ntBASIC13.15□□□□□ -0.3
CCR9P51686 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CCR9P51686 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 AC090505.1-201ENST00000430515 1834 ntBASIC13.15□□□□□ -0.3
CCR9P51686 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CCR9P51686 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCR9P51686 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.15□□□□□ -0.3
CCR9P51686 AC130686.1-201ENST00000622936 2466 ntBASIC13.15□□□□□ -0.3
CCR9P51686 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.15□□□□□ -0.31
CCR9P51686 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
CCR9P51686 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CCR9P51686 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCR9P51686 AC016397.2-201ENST00000624848 1985 ntBASIC13.14□□□□□ -0.31
CCR9P51686 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.14□□□□□ -0.31
CCR9P51686 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.14□□□□□ -0.31
CCR9P51686 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCR9P51686 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCR9P51686 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCR9P51686 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CCR9P51686 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCR9P51686 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCR9P51686 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCR9P51686 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.14□□□□□ -0.31
CCR9P51686 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCR9P51686 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CCR9P51686 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCR9P51686 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCR9P51686 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CCR9P51686 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCR9P51686 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCR9P51686 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCR9P51686 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCR9P51686 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCR9P51686 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CCR9P51686 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.14□□□□□ -0.31
CCR9P51686 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCR9P51686 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.14□□□□□ -0.31
CCR9P51686 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.14□□□□□ -0.31
CCR9P51686 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms