Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SLC1A3P43003 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.73□□□□□ -0.21
SLC1A3P43003 KRT8P35-201ENST00000483942 1338 ntBASIC13.73□□□□□ -0.21
SLC1A3P43003 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SLC1A3P43003 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.73□□□□□ -0.21
SLC1A3P43003 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.73□□□□□ -0.21
SLC1A3P43003 AC098614.1-201ENST00000368528 745 ntBASIC13.73□□□□□ -0.21
SLC1A3P43003 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.73□□□□□ -0.21
SLC1A3P43003 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
SLC1A3P43003 AP006294.1-201ENST00000415407 339 ntBASIC13.73□□□□□ -0.21
SLC1A3P43003 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.73□□□□□ -0.21
SLC1A3P43003 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.73□□□□□ -0.21
SLC1A3P43003 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.73□□□□□ -0.21
SLC1A3P43003 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.73□□□□□ -0.21
SLC1A3P43003 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.73□□□□□ -0.21
SLC1A3P43003 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.73□□□□□ -0.21
SLC1A3P43003 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.73□□□□□ -0.21
SLC1A3P43003 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.73□□□□□ -0.21
SLC1A3P43003 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SLC1A3P43003 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.73□□□□□ -0.21
SLC1A3P43003 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SLC1A3P43003 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.73□□□□□ -0.21
SLC1A3P43003 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SLC1A3P43003 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.73□□□□□ -0.21
SLC1A3P43003 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.73□□□□□ -0.21
SLC1A3P43003 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SLC1A3P43003 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SLC1A3P43003 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SLC1A3P43003 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SLC1A3P43003 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SLC1A3P43003 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.72□□□□□ -0.21
SLC1A3P43003 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.72□□□□□ -0.21
SLC1A3P43003 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.72□□□□□ -0.21
SLC1A3P43003 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.72□□□□□ -0.21
SLC1A3P43003 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
SLC1A3P43003 ACTG1P3-201ENST00000431775 1114 ntBASIC13.72□□□□□ -0.21
SLC1A3P43003 EIF3FP3-201ENST00000434851 1086 ntBASIC13.72□□□□□ -0.21
SLC1A3P43003 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC1A3P43003 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.72□□□□□ -0.21
SLC1A3P43003 AC026434.2-201ENST00000506094 1078 ntBASIC13.72□□□□□ -0.21
SLC1A3P43003 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.72□□□□□ -0.21
SLC1A3P43003 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC1A3P43003 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.72□□□□□ -0.21
SLC1A3P43003 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.72□□□□□ -0.21
SLC1A3P43003 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC1A3P43003 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.72□□□□□ -0.21
SLC1A3P43003 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.72□□□□□ -0.21
SLC1A3P43003 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SLC1A3P43003 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SLC1A3P43003 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
SLC1A3P43003 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SLC1A3P43003 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms