Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPB2P35606 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPB2P35606 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPB2P35606 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPB2P35606 AC144522.1-201ENST00000625111 1658 ntBASIC16.92■□□□□ 0.3
COPB2P35606 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPB2P35606 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
COPB2P35606 C18orf15-201ENST00000623680 2534 ntBASIC16.92■□□□□ 0.3
COPB2P35606 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
COPB2P35606 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
COPB2P35606 AC091046.1-201ENST00000331871 207 ntBASIC16.92■□□□□ 0.3
COPB2P35606 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPB2P35606 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.92■□□□□ 0.3
COPB2P35606 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.92■□□□□ 0.3
COPB2P35606 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.92■□□□□ 0.3
COPB2P35606 AC019193.1-201ENST00000506678 823 ntBASIC16.92■□□□□ 0.3
COPB2P35606 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.92■□□□□ 0.3
COPB2P35606 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.92■□□□□ 0.3
COPB2P35606 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COPB2P35606 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.92■□□□□ 0.3
COPB2P35606 SPCS2P2-201ENST00000603270 608 ntBASIC16.92■□□□□ 0.3
COPB2P35606 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.92■□□□□ 0.3
COPB2P35606 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.92■□□□□ 0.3
COPB2P35606 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.92■□□□□ 0.3
COPB2P35606 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPB2P35606 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
COPB2P35606 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.92■□□□□ 0.3
COPB2P35606 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
COPB2P35606 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.92■□□□□ 0.3
COPB2P35606 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
COPB2P35606 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
COPB2P35606 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.92■□□□□ 0.3
COPB2P35606 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
COPB2P35606 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
COPB2P35606 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
COPB2P35606 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COPB2P35606 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
COPB2P35606 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPB2P35606 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPB2P35606 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.92■□□□□ 0.3
COPB2P35606 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPB2P35606 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPB2P35606 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPB2P35606 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPB2P35606 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPB2P35606 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPB2P35606 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.91■□□□□ 0.3
COPB2P35606 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COPB2P35606 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPB2P35606 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPB2P35606 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPB2P35606 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.91■□□□□ 0.3
COPB2P35606 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPB2P35606 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
COPB2P35606 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.91■□□□□ 0.3
COPB2P35606 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COPB2P35606 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.91■□□□□ 0.3
COPB2P35606 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.91■□□□□ 0.3
COPB2P35606 CEP164P1-201ENST00000455142 418 ntBASIC16.91■□□□□ 0.3
COPB2P35606 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.91■□□□□ 0.3
COPB2P35606 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.91■□□□□ 0.3
COPB2P35606 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPB2P35606 RBM8B-201ENST00000555532 525 ntBASIC16.91■□□□□ 0.3
COPB2P35606 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.91■□□□□ 0.3
COPB2P35606 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.91■□□□□ 0.3
COPB2P35606 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
COPB2P35606 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPB2P35606 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPB2P35606 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPB2P35606 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPB2P35606 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COPB2P35606 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPB2P35606 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPB2P35606 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
COPB2P35606 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
COPB2P35606 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COPB2P35606 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.9■□□□□ 0.3
COPB2P35606 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.9■□□□□ 0.3
COPB2P35606 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
COPB2P35606 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
COPB2P35606 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.9■□□□□ 0.3
COPB2P35606 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
COPB2P35606 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
COPB2P35606 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.9■□□□□ 0.3
COPB2P35606 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.9■□□□□ 0.3
COPB2P35606 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 AC026316.1-201ENST00000398900 414 ntBASIC16.9■□□□□ 0.3
COPB2P35606 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COPB2P35606 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.9■□□□□ 0.3
COPB2P35606 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms