Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 RRP7BP-205ENST00000566851 833 ntBASIC15.77■□□□□ 0.12
CTNNA1P35221 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.77■□□□□ 0.12
CTNNA1P35221 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.77■□□□□ 0.12
CTNNA1P35221 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.77■□□□□ 0.12
CTNNA1P35221 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.77■□□□□ 0.12
CTNNA1P35221 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.77■□□□□ 0.12
CTNNA1P35221 BX539320.1-201ENST00000623759 877 ntBASIC15.77■□□□□ 0.12
CTNNA1P35221 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.77■□□□□ 0.11
CTNNA1P35221 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTNNA1P35221 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.77■□□□□ 0.11
CTNNA1P35221 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTNNA1P35221 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTNNA1P35221 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.77■□□□□ 0.11
CTNNA1P35221 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.77■□□□□ 0.11
CTNNA1P35221 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
CTNNA1P35221 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CTNNA1P35221 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CTNNA1P35221 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CTNNA1P35221 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTNNA1P35221 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CTNNA1P35221 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTNNA1P35221 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTNNA1P35221 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CTNNA1P35221 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTNNA1P35221 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTNNA1P35221 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CTNNA1P35221 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CTNNA1P35221 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.77■□□□□ 0.11
CTNNA1P35221 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTNNA1P35221 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTNNA1P35221 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CTNNA1P35221 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTNNA1P35221 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.76■□□□□ 0.11
CTNNA1P35221 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.76■□□□□ 0.11
CTNNA1P35221 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CTNNA1P35221 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTNNA1P35221 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTNNA1P35221 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTNNA1P35221 AC138969.2-201ENST00000532739 9932 ntBASIC15.76■□□□□ 0.11
CTNNA1P35221 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.76■□□□□ 0.11
CTNNA1P35221 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTNNA1P35221 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.76■□□□□ 0.11
CTNNA1P35221 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CTNNA1P35221 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTNNA1P35221 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTNNA1P35221 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTNNA1P35221 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTNNA1P35221 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.76■□□□□ 0.11
CTNNA1P35221 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.76■□□□□ 0.11
CTNNA1P35221 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.76■□□□□ 0.11
CTNNA1P35221 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTNNA1P35221 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.76■□□□□ 0.11
CTNNA1P35221 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.76■□□□□ 0.11
CTNNA1P35221 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.76■□□□□ 0.11
CTNNA1P35221 AL390955.2-201ENST00000603032 514 ntBASIC15.76■□□□□ 0.11
CTNNA1P35221 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.76■□□□□ 0.11
CTNNA1P35221 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.76■□□□□ 0.11
CTNNA1P35221 AC007431.3-201ENST00000623221 587 ntBASIC15.76■□□□□ 0.11
CTNNA1P35221 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.76■□□□□ 0.11
CTNNA1P35221 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.76■□□□□ 0.11
CTNNA1P35221 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.76■□□□□ 0.11
CTNNA1P35221 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.76■□□□□ 0.11
CTNNA1P35221 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
CTNNA1P35221 INTS4P2-202ENST00000614726 2019 ntBASIC15.76■□□□□ 0.11
CTNNA1P35221 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.76■□□□□ 0.11
CTNNA1P35221 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTNNA1P35221 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.76■□□□□ 0.11
CTNNA1P35221 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.76■□□□□ 0.11
CTNNA1P35221 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
CTNNA1P35221 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.76■□□□□ 0.11
CTNNA1P35221 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.76■□□□□ 0.11
CTNNA1P35221 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTNNA1P35221 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.76■□□□□ 0.11
CTNNA1P35221 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTNNA1P35221 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CTNNA1P35221 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CTNNA1P35221 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTNNA1P35221 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTNNA1P35221 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTNNA1P35221 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.75■□□□□ 0.11
CTNNA1P35221 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.75■□□□□ 0.11
CTNNA1P35221 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.75■□□□□ 0.11
CTNNA1P35221 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTNNA1P35221 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CTNNA1P35221 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTNNA1P35221 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.75■□□□□ 0.11
CTNNA1P35221 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTNNA1P35221 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.75■□□□□ 0.11
CTNNA1P35221 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.75■□□□□ 0.11
CTNNA1P35221 CICP20-201ENST00000443330 2801 ntBASIC15.75■□□□□ 0.11
CTNNA1P35221 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CTNNA1P35221 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CTNNA1P35221 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTNNA1P35221 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CTNNA1P35221 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CTNNA1P35221 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CTNNA1P35221 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.75■□□□□ 0.11
CTNNA1P35221 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CTNNA1P35221 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.75■□□□□ 0.11
CTNNA1P35221 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms