Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 AC025183.3-201ENST00000623526 1482 ntBASIC14.42□□□□□ -0.1
HOXA6P31267 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HOXA6P31267 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.42□□□□□ -0.1
HOXA6P31267 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HOXA6P31267 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.42□□□□□ -0.1
HOXA6P31267 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.42□□□□□ -0.1
HOXA6P31267 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HOXA6P31267 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HOXA6P31267 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HOXA6P31267 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HOXA6P31267 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.41□□□□□ -0.1
HOXA6P31267 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXA6P31267 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.41□□□□□ -0.1
HOXA6P31267 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 PYY2-201ENST00000315776 282 ntBASIC14.41□□□□□ -0.1
HOXA6P31267 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.41□□□□□ -0.1
HOXA6P31267 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC14.41□□□□□ -0.1
HOXA6P31267 OR8T1P-201ENST00000421347 918 ntBASIC14.41□□□□□ -0.1
HOXA6P31267 PPP1R2P4-201ENST00000424051 595 ntBASIC14.41□□□□□ -0.1
HOXA6P31267 KRT17P4-201ENST00000429445 819 ntBASIC14.41□□□□□ -0.1
HOXA6P31267 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXA6P31267 DDX39AP1-201ENST00000445147 1181 ntBASIC14.41□□□□□ -0.1
HOXA6P31267 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 PPIA-208ENST00000489459 907 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXA6P31267 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXA6P31267 AC093826.1-201ENST00000508655 993 ntBASIC14.41□□□□□ -0.1
HOXA6P31267 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXA6P31267 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.41□□□□□ -0.1
HOXA6P31267 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.41□□□□□ -0.1
HOXA6P31267 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.41□□□□□ -0.1
HOXA6P31267 AP005212.2-201ENST00000584979 510 ntBASIC14.41□□□□□ -0.1
HOXA6P31267 AP003392.6-201ENST00000607709 325 ntBASIC14.41□□□□□ -0.1
HOXA6P31267 PPIA-210ENST00000620047 827 ntTSL 5 BASIC14.41□□□□□ -0.1
HOXA6P31267 LINC00244-201ENST00000625073 613 ntBASIC14.41□□□□□ -0.1
HOXA6P31267 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 KHSRPP1-201ENST00000427983 1768 ntBASIC14.41□□□□□ -0.1
HOXA6P31267 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HOXA6P31267 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXA6P31267 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXA6P31267 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 ZNF436-AS1-201ENST00000335648 2547 ntBASIC14.41□□□□□ -0.1
HOXA6P31267 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HOXA6P31267 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.41□□□□□ -0.1
HOXA6P31267 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXA6P31267 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.41□□□□□ -0.1
HOXA6P31267 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HOXA6P31267 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA6P31267 SSR4P1-203ENST00000599569 2260 ntBASIC14.4□□□□□ -0.1
HOXA6P31267 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.4□□□□□ -0.1
HOXA6P31267 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA6P31267 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HOXA6P31267 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA6P31267 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA6P31267 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA6P31267 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA6P31267 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA6P31267 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.4□□□□□ -0.1
HOXA6P31267 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.4□□□□□ -0.1
HOXA6P31267 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HOXA6P31267 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
HOXA6P31267 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms