Protein–RNA interactions for Protein: P17482

HOXB9, Homeobox protein Hox-B9, humanhuman

Predicted RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB9P17482 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
HOXB9P17482 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB9P17482 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB9P17482 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB9P17482 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXB9P17482 AC015688.4-201ENST00000580780 1647 ntBASIC13.97□□□□□ -0.17
HOXB9P17482 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
HOXB9P17482 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
HOXB9P17482 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB9P17482 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB9P17482 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB9P17482 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB9P17482 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB9P17482 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB9P17482 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
HOXB9P17482 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB9P17482 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.96□□□□□ -0.17
HOXB9P17482 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB9P17482 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB9P17482 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
HOXB9P17482 AC139712.1-201ENST00000378256 1875 ntBASIC13.96□□□□□ -0.17
HOXB9P17482 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.96□□□□□ -0.17
HOXB9P17482 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB9P17482 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB9P17482 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB9P17482 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB9P17482 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.96□□□□□ -0.17
HOXB9P17482 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB9P17482 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB9P17482 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.96□□□□□ -0.17
HOXB9P17482 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB9P17482 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB9P17482 FO681548.1-201ENST00000455617 1132 ntBASIC13.96□□□□□ -0.17
HOXB9P17482 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.96□□□□□ -0.17
HOXB9P17482 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.96□□□□□ -0.17
HOXB9P17482 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.96□□□□□ -0.17
HOXB9P17482 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.96□□□□□ -0.17
HOXB9P17482 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.96□□□□□ -0.17
HOXB9P17482 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.96□□□□□ -0.17
HOXB9P17482 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB9P17482 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB9P17482 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXB9P17482 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
HOXB9P17482 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HOXB9P17482 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.96□□□□□ -0.18
HOXB9P17482 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HOXB9P17482 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HOXB9P17482 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HOXB9P17482 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
HOXB9P17482 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HOXB9P17482 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.96□□□□□ -0.18
HOXB9P17482 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.96□□□□□ -0.18
HOXB9P17482 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.96□□□□□ -0.18
HOXB9P17482 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.96□□□□□ -0.18
HOXB9P17482 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HOXB9P17482 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.95□□□□□ -0.18
HOXB9P17482 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXB9P17482 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HOXB9P17482 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXB9P17482 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
HOXB9P17482 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HOXB9P17482 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXB9P17482 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HOXB9P17482 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HOXB9P17482 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 ACKR1-201ENST00000368121 1240 ntBASIC13.95□□□□□ -0.18
HOXB9P17482 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.95□□□□□ -0.18
HOXB9P17482 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.95□□□□□ -0.18
HOXB9P17482 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXB9P17482 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.95□□□□□ -0.18
HOXB9P17482 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXB9P17482 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.95□□□□□ -0.18
HOXB9P17482 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXB9P17482 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXB9P17482 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HOXB9P17482 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.95□□□□□ -0.18
HOXB9P17482 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXB9P17482 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
HOXB9P17482 LRRC59-203ENST00000576448 1531 ntBASIC13.95□□□□□ -0.18
HOXB9P17482 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HOXB9P17482 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms