Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.33■□□□□ 0.2
SMPD1P17405 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMPD1P17405 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMPD1P17405 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.33■□□□□ 0.2
SMPD1P17405 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.33■□□□□ 0.2
SMPD1P17405 AC084781.1-201ENST00000613737 656 ntBASIC16.33■□□□□ 0.2
SMPD1P17405 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMPD1P17405 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMPD1P17405 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMPD1P17405 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMPD1P17405 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SMPD1P17405 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMPD1P17405 KHSRPP1-201ENST00000427983 1768 ntBASIC16.33■□□□□ 0.2
SMPD1P17405 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMPD1P17405 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMPD1P17405 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.32■□□□□ 0.2
SMPD1P17405 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMPD1P17405 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMPD1P17405 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMPD1P17405 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMPD1P17405 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMPD1P17405 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SMPD1P17405 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMPD1P17405 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SMPD1P17405 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMPD1P17405 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.32■□□□□ 0.2
SMPD1P17405 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SMPD1P17405 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.32■□□□□ 0.2
SMPD1P17405 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.32■□□□□ 0.2
SMPD1P17405 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMPD1P17405 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.32■□□□□ 0.2
SMPD1P17405 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.32■□□□□ 0.2
SMPD1P17405 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.32■□□□□ 0.2
SMPD1P17405 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.32■□□□□ 0.2
SMPD1P17405 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SMPD1P17405 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.32■□□□□ 0.2
SMPD1P17405 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMPD1P17405 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.32■□□□□ 0.2
SMPD1P17405 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMPD1P17405 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.32■□□□□ 0.2
SMPD1P17405 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMPD1P17405 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMPD1P17405 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMPD1P17405 AC025262.2-201ENST00000623975 1056 ntBASIC16.32■□□□□ 0.2
SMPD1P17405 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMPD1P17405 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SMPD1P17405 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMPD1P17405 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMPD1P17405 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMPD1P17405 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMPD1P17405 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.31■□□□□ 0.2
SMPD1P17405 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMPD1P17405 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMPD1P17405 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMPD1P17405 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.31■□□□□ 0.2
SMPD1P17405 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMPD1P17405 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMPD1P17405 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMPD1P17405 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMPD1P17405 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMPD1P17405 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.31■□□□□ 0.2
SMPD1P17405 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.31■□□□□ 0.2
SMPD1P17405 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMPD1P17405 AC132872.4-202ENST00000622924 2756 ntBASIC16.31■□□□□ 0.2
SMPD1P17405 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMPD1P17405 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMPD1P17405 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SMPD1P17405 KRT17P5-201ENST00000332088 839 ntBASIC16.31■□□□□ 0.2
SMPD1P17405 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.31■□□□□ 0.2
SMPD1P17405 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.31■□□□□ 0.2
SMPD1P17405 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.31■□□□□ 0.2
SMPD1P17405 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.31■□□□□ 0.2
SMPD1P17405 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.31■□□□□ 0.2
SMPD1P17405 AC114501.1-201ENST00000445949 172 ntBASIC16.31■□□□□ 0.2
SMPD1P17405 RPL18AP3-201ENST00000462885 528 ntBASIC16.31■□□□□ 0.2
SMPD1P17405 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMPD1P17405 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMPD1P17405 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMPD1P17405 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.31■□□□□ 0.2
SMPD1P17405 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.31■□□□□ 0.2
SMPD1P17405 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.31■□□□□ 0.2
SMPD1P17405 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.31■□□□□ 0.2
SMPD1P17405 HLA-C-210ENST00000640219 976 ntBASIC16.31■□□□□ 0.2
SMPD1P17405 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
SMPD1P17405 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMPD1P17405 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMPD1P17405 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.31■□□□□ 0.2
SMPD1P17405 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.31■□□□□ 0.2
SMPD1P17405 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMPD1P17405 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMPD1P17405 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMPD1P17405 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMPD1P17405 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.3■□□□□ 0.2
SMPD1P17405 AC015688.4-201ENST00000580780 1647 ntBASIC16.3■□□□□ 0.2
SMPD1P17405 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SMPD1P17405 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SMPD1P17405 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
SMPD1P17405 AP002353.1-201ENST00000528257 1599 ntBASIC16.3■□□□□ 0.2
SMPD1P17405 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMPD1P17405 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms