Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CCL3L1P16619 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL3L1P16619 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL3L1P16619 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CCL3L1P16619 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
CCL3L1P16619 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CCL3L1P16619 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CCL3L1P16619 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CCL3L1P16619 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 GK-202ENST00000378941 458 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL3L1P16619 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL3L1P16619 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.29□□□□□ -0.44
CCL3L1P16619 CD8B2-202ENST00000417670 633 ntBASIC12.29□□□□□ -0.44
CCL3L1P16619 ATP5G2P4-201ENST00000442175 420 ntBASIC12.29□□□□□ -0.44
CCL3L1P16619 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL3L1P16619 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL3L1P16619 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.29□□□□□ -0.44
CCL3L1P16619 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL3L1P16619 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.29□□□□□ -0.44
CCL3L1P16619 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CCL3L1P16619 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL3L1P16619 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.29□□□□□ -0.44
CCL3L1P16619 AC133552.6-201ENST00000613406 534 ntBASIC12.29□□□□□ -0.44
CCL3L1P16619 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL3L1P16619 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL3L1P16619 AC140479.7-201ENST00000636301 2332 ntBASIC12.29□□□□□ -0.44
CCL3L1P16619 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CCL3L1P16619 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL3L1P16619 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL3L1P16619 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CCL3L1P16619 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL3L1P16619 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 AL136172.1-201ENST00000598590 1394 ntBASIC12.29□□□□□ -0.44
CCL3L1P16619 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CCL3L1P16619 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
CCL3L1P16619 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.29□□□□□ -0.44
CCL3L1P16619 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CCL3L1P16619 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.29□□□□□ -0.44
CCL3L1P16619 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL3L1P16619 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
CCL3L1P16619 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL3L1P16619 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL3L1P16619 AC232323.1-201ENST00000540724 2099 ntBASIC12.28□□□□□ -0.44
CCL3L1P16619 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL3L1P16619 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 AC007292.2-201ENST00000593524 1812 ntBASIC12.28□□□□□ -0.44
CCL3L1P16619 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CCL3L1P16619 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CCL3L1P16619 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CCL3L1P16619 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.28□□□□□ -0.44
CCL3L1P16619 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 RN7SKP175-201ENST00000408472 289 ntBASIC12.28□□□□□ -0.44
CCL3L1P16619 AC099336.1-201ENST00000417053 1171 ntBASIC12.28□□□□□ -0.44
CCL3L1P16619 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.28□□□□□ -0.44
CCL3L1P16619 HLA-V-201ENST00000429037 534 ntBASIC12.28□□□□□ -0.44
CCL3L1P16619 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CCL3L1P16619 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.28□□□□□ -0.44
CCL3L1P16619 KRT223P-202ENST00000449164 1292 ntBASIC12.28□□□□□ -0.44
CCL3L1P16619 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL3L1P16619 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.28□□□□□ -0.44
CCL3L1P16619 AC119751.2-201ENST00000504529 210 ntBASIC12.28□□□□□ -0.44
CCL3L1P16619 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.28□□□□□ -0.44
CCL3L1P16619 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.28□□□□□ -0.44
CCL3L1P16619 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.28□□□□□ -0.44
CCL3L1P16619 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.28□□□□□ -0.44
CCL3L1P16619 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.28□□□□□ -0.44
CCL3L1P16619 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.28□□□□□ -0.44
CCL3L1P16619 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.28□□□□□ -0.44
CCL3L1P16619 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms