Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.63■□□□□ 0.09
RARAP10276 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.63■□□□□ 0.09
RARAP10276 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.63■□□□□ 0.09
RARAP10276 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.63■□□□□ 0.09
RARAP10276 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RARAP10276 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RARAP10276 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
RARAP10276 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RARAP10276 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RARAP10276 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RARAP10276 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RARAP10276 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RARAP10276 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RARAP10276 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RARAP10276 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RARAP10276 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.62■□□□□ 0.09
RARAP10276 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RARAP10276 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.62■□□□□ 0.09
RARAP10276 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
RARAP10276 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RARAP10276 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RARAP10276 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.62■□□□□ 0.09
RARAP10276 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RARAP10276 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RARAP10276 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.62■□□□□ 0.09
RARAP10276 AC010319.3-201ENST00000597028 470 ntBASIC15.62■□□□□ 0.09
RARAP10276 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RARAP10276 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RARAP10276 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RARAP10276 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.62■□□□□ 0.09
RARAP10276 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RARAP10276 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RARAP10276 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RARAP10276 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RARAP10276 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RARAP10276 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RARAP10276 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 MST1P2-201ENST00000457982 2291 ntBASIC15.61■□□□□ 0.09
RARAP10276 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
RARAP10276 AC011474.4-201ENST00000623523 2076 ntBASIC15.61■□□□□ 0.09
RARAP10276 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RARAP10276 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RARAP10276 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
RARAP10276 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.61■□□□□ 0.09
RARAP10276 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.61■□□□□ 0.09
RARAP10276 BAATP1-201ENST00000412284 1225 ntBASIC15.61■□□□□ 0.09
RARAP10276 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.61■□□□□ 0.09
RARAP10276 AP006294.1-201ENST00000415407 339 ntBASIC15.61■□□□□ 0.09
RARAP10276 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 AC012441.1-201ENST00000446669 685 ntBASIC15.61■□□□□ 0.09
RARAP10276 FO681548.1-201ENST00000455617 1132 ntBASIC15.61■□□□□ 0.09
RARAP10276 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RARAP10276 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.61■□□□□ 0.09
RARAP10276 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.61■□□□□ 0.09
RARAP10276 MIR5189-201ENST00000577370 114 ntBASIC15.61■□□□□ 0.09
RARAP10276 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.61■□□□□ 0.09
RARAP10276 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.61■□□□□ 0.09
RARAP10276 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
RARAP10276 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.61■□□□□ 0.09
RARAP10276 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.61■□□□□ 0.09
RARAP10276 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.61■□□□□ 0.09
RARAP10276 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
RARAP10276 AC134312.5-201ENST00000568031 1313 ntBASIC15.61■□□□□ 0.09
RARAP10276 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.61■□□□□ 0.09
RARAP10276 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.61■□□□□ 0.09
RARAP10276 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.61■□□□□ 0.09
RARAP10276 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.61■□□□□ 0.09
RARAP10276 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.61■□□□□ 0.09
RARAP10276 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RARAP10276 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RARAP10276 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.6■□□□□ 0.09
RARAP10276 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RARAP10276 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RARAP10276 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
RARAP10276 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms