Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.31■□□□□ 0.2
CLTAP09496 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLTAP09496 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.31■□□□□ 0.2
CLTAP09496 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.31■□□□□ 0.2
CLTAP09496 HOMER2P2-201ENST00000451621 847 ntBASIC16.31■□□□□ 0.2
CLTAP09496 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.31■□□□□ 0.2
CLTAP09496 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.31■□□□□ 0.2
CLTAP09496 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.31■□□□□ 0.2
CLTAP09496 AP003171.2-201ENST00000528208 925 ntBASIC16.31■□□□□ 0.2
CLTAP09496 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.31■□□□□ 0.2
CLTAP09496 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.31■□□□□ 0.2
CLTAP09496 AC073413.1-201ENST00000603927 732 ntBASIC16.31■□□□□ 0.2
CLTAP09496 AC138696.2-201ENST00000607376 223 ntBASIC16.31■□□□□ 0.2
CLTAP09496 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 AC079781.5-202ENST00000641784 3743 ntBASIC16.31■□□□□ 0.2
CLTAP09496 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 AC013726.1-201ENST00000563747 2285 ntBASIC16.31■□□□□ 0.2
CLTAP09496 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CLTAP09496 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CLTAP09496 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.31■□□□□ 0.2
CLTAP09496 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLTAP09496 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLTAP09496 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLTAP09496 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLTAP09496 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLTAP09496 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLTAP09496 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLTAP09496 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.3■□□□□ 0.2
CLTAP09496 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CLTAP09496 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.3■□□□□ 0.2
CLTAP09496 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLTAP09496 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLTAP09496 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLTAP09496 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.3■□□□□ 0.2
CLTAP09496 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLTAP09496 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLTAP09496 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLTAP09496 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLTAP09496 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.3■□□□□ 0.2
CLTAP09496 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.3■□□□□ 0.2
CLTAP09496 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLTAP09496 TLE1P1-201ENST00000422965 589 ntBASIC16.3■□□□□ 0.2
CLTAP09496 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.3■□□□□ 0.2
CLTAP09496 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.3■□□□□ 0.2
CLTAP09496 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLTAP09496 AL355994.2-201ENST00000447882 704 ntBASIC16.3■□□□□ 0.2
CLTAP09496 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.3■□□□□ 0.2
CLTAP09496 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.3■□□□□ 0.2
CLTAP09496 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.3■□□□□ 0.2
CLTAP09496 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.3■□□□□ 0.2
CLTAP09496 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.3■□□□□ 0.2
CLTAP09496 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.3■□□□□ 0.2
CLTAP09496 ZACNP1-201ENST00000612259 710 ntBASIC16.3■□□□□ 0.2
CLTAP09496 AC009542.2-202ENST00000619004 1067 ntBASIC16.3■□□□□ 0.2
CLTAP09496 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.3■□□□□ 0.2
CLTAP09496 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CLTAP09496 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLTAP09496 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CLTAP09496 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLTAP09496 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLTAP09496 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLTAP09496 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLTAP09496 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLTAP09496 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLTAP09496 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLTAP09496 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLTAP09496 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.3■□□□□ 0.2
CLTAP09496 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLTAP09496 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.3■□□□□ 0.2
CLTAP09496 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.3■□□□□ 0.2
CLTAP09496 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.29■□□□□ 0.2
CLTAP09496 PTENP1-202ENST00000532280 3996 ntBASIC16.29■□□□□ 0.2
CLTAP09496 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLTAP09496 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.29■□□□□ 0.2
CLTAP09496 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms