Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HTR1AP08908 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HTR1AP08908 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HTR1AP08908 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HTR1AP08908 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HTR1AP08908 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HTR1AP08908 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HTR1AP08908 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.6□□□□□ -0.23
HTR1AP08908 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HTR1AP08908 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.6□□□□□ -0.23
HTR1AP08908 KRT18P32-201ENST00000424695 1287 ntBASIC13.6□□□□□ -0.23
HTR1AP08908 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.6□□□□□ -0.23
HTR1AP08908 MKNK2P1-201ENST00000437526 628 ntBASIC13.6□□□□□ -0.23
HTR1AP08908 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.6□□□□□ -0.23
HTR1AP08908 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HTR1AP08908 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.6□□□□□ -0.23
HTR1AP08908 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HTR1AP08908 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.6□□□□□ -0.23
HTR1AP08908 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HTR1AP08908 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.6□□□□□ -0.23
HTR1AP08908 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HTR1AP08908 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.6□□□□□ -0.23
HTR1AP08908 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.6□□□□□ -0.23
HTR1AP08908 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HTR1AP08908 SAMD11P1-201ENST00000571429 661 ntBASIC13.6□□□□□ -0.23
HTR1AP08908 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.6□□□□□ -0.23
HTR1AP08908 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.6□□□□□ -0.23
HTR1AP08908 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.6□□□□□ -0.23
HTR1AP08908 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HTR1AP08908 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HTR1AP08908 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HTR1AP08908 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HTR1AP08908 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HTR1AP08908 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HTR1AP08908 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HTR1AP08908 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HTR1AP08908 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.6□□□□□ -0.23
HTR1AP08908 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.6□□□□□ -0.23
HTR1AP08908 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HTR1AP08908 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
HTR1AP08908 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.6□□□□□ -0.23
HTR1AP08908 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.6□□□□□ -0.23
HTR1AP08908 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HTR1AP08908 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.59□□□□□ -0.23
HTR1AP08908 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
HTR1AP08908 KRT8P12-202ENST00000472924 1397 ntBASIC13.59□□□□□ -0.23
HTR1AP08908 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.59□□□□□ -0.23
HTR1AP08908 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
HTR1AP08908 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.59□□□□□ -0.23
HTR1AP08908 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.59□□□□□ -0.23
HTR1AP08908 MTND6P24-201ENST00000440466 518 ntBASIC13.59□□□□□ -0.23
HTR1AP08908 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.59□□□□□ -0.23
HTR1AP08908 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
HTR1AP08908 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 RN7SL828P-201ENST00000607615 303 ntBASIC13.59□□□□□ -0.23
HTR1AP08908 AC074044.1-201ENST00000609673 707 ntBASIC13.59□□□□□ -0.23
HTR1AP08908 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.59□□□□□ -0.23
HTR1AP08908 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HTR1AP08908 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.59□□□□□ -0.23
HTR1AP08908 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HTR1AP08908 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.59□□□□□ -0.23
HTR1AP08908 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HTR1AP08908 AL157996.1-201ENST00000624684 2299 ntBASIC13.59□□□□□ -0.23
HTR1AP08908 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HTR1AP08908 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
HTR1AP08908 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HTR1AP08908 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.58□□□□□ -0.23
HTR1AP08908 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
HTR1AP08908 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
HTR1AP08908 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.58□□□□□ -0.23
HTR1AP08908 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
HTR1AP08908 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
HTR1AP08908 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HTR1AP08908 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.58□□□□□ -0.24
HTR1AP08908 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HTR1AP08908 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
HTR1AP08908 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HTR1AP08908 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HTR1AP08908 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HTR1AP08908 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HTR1AP08908 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms