Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MAGEA5-201ENST00000446757 942 ntBASIC17.4■□□□□ 0.38
HLA-DOAP06340 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DOAP06340 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.4■□□□□ 0.38
HLA-DOAP06340 POU5F1P2-201ENST00000521750 823 ntBASIC17.4■□□□□ 0.38
HLA-DOAP06340 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOAP06340 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
HLA-DOAP06340 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DOAP06340 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.4■□□□□ 0.38
HLA-DOAP06340 MIR3907-201ENST00000579424 151 ntBASIC17.4■□□□□ 0.38
HLA-DOAP06340 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DOAP06340 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.4■□□□□ 0.38
HLA-DOAP06340 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.4■□□□□ 0.38
HLA-DOAP06340 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DOAP06340 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DOAP06340 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.4■□□□□ 0.38
HLA-DOAP06340 AL157813.1-201ENST00000612996 587 ntBASIC17.4■□□□□ 0.38
HLA-DOAP06340 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DOAP06340 AC079336.7-201ENST00000623428 1078 ntBASIC17.4■□□□□ 0.38
HLA-DOAP06340 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DOAP06340 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOAP06340 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOAP06340 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOAP06340 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DOAP06340 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOAP06340 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DOAP06340 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOAP06340 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DOAP06340 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOAP06340 AC013268.4-201ENST00000637413 2228 ntBASIC17.4■□□□□ 0.38
HLA-DOAP06340 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DOAP06340 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOAP06340 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HLA-DOAP06340 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOAP06340 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOAP06340 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOAP06340 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOAP06340 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DOAP06340 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOAP06340 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOAP06340 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DOAP06340 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HLA-DOAP06340 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
HLA-DOAP06340 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
HLA-DOAP06340 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
HLA-DOAP06340 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DOAP06340 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.39■□□□□ 0.37
HLA-DOAP06340 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.39■□□□□ 0.37
HLA-DOAP06340 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.39■□□□□ 0.37
HLA-DOAP06340 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.39■□□□□ 0.37
HLA-DOAP06340 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HLA-DOAP06340 TMBIM7P-202ENST00000641474 1516 ntBASIC17.39■□□□□ 0.37
HLA-DOAP06340 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DOAP06340 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 PDIA3P2-201ENST00000428073 158 ntBASIC17.39■□□□□ 0.37
HLA-DOAP06340 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.39■□□□□ 0.37
HLA-DOAP06340 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
HLA-DOAP06340 AC103988.2-201ENST00000561804 725 ntBASIC17.39■□□□□ 0.37
HLA-DOAP06340 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.39■□□□□ 0.37
HLA-DOAP06340 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
HLA-DOAP06340 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.39■□□□□ 0.37
HLA-DOAP06340 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HLA-DOAP06340 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.39■□□□□ 0.37
HLA-DOAP06340 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.39■□□□□ 0.37
HLA-DOAP06340 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 KRT8P28-201ENST00000433288 1390 ntBASIC17.39■□□□□ 0.37
HLA-DOAP06340 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.39■□□□□ 0.37
HLA-DOAP06340 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
HLA-DOAP06340 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DOAP06340 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DOAP06340 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DOAP06340 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HLA-DOAP06340 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.38■□□□□ 0.37
HLA-DOAP06340 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DOAP06340 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HLA-DOAP06340 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms