Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 KRT8P22-201ENST00000562317 1415 ntBASIC13.64□□□□□ -0.23
HIST1H2ABP04908 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 AC113367.3-201ENST00000508316 1912 ntBASIC13.64□□□□□ -0.23
HIST1H2ABP04908 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 STRCP1-201ENST00000509801 5328 ntBASIC13.64□□□□□ -0.23
HIST1H2ABP04908 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 SPTLC1P1-201ENST00000447199 261 ntBASIC13.64□□□□□ -0.23
HIST1H2ABP04908 MYCLP2-201ENST00000449268 967 ntBASIC13.64□□□□□ -0.23
HIST1H2ABP04908 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 SPDYE22P-201ENST00000582158 798 ntBASIC13.64□□□□□ -0.23
HIST1H2ABP04908 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 AL132655.2-201ENST00000596276 594 ntBASIC13.64□□□□□ -0.23
HIST1H2ABP04908 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 LRRC59-203ENST00000576448 1531 ntBASIC13.64□□□□□ -0.23
HIST1H2ABP04908 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
HIST1H2ABP04908 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 SERBP1P5-201ENST00000510079 1181 ntBASIC13.63□□□□□ -0.23
HIST1H2ABP04908 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 AL359711.2-201ENST00000563105 872 ntBASIC13.63□□□□□ -0.23
HIST1H2ABP04908 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.63□□□□□ -0.23
HIST1H2ABP04908 AC027796.2-201ENST00000575326 344 ntBASIC13.63□□□□□ -0.23
HIST1H2ABP04908 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms