Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.45□□□□□ -0.1
TNFP01375 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.45□□□□□ -0.1
TNFP01375 RCC2P8-201ENST00000502779 1035 ntBASIC14.45□□□□□ -0.1
TNFP01375 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.45□□□□□ -0.1
TNFP01375 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.45□□□□□ -0.1
TNFP01375 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.45□□□□□ -0.1
TNFP01375 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.45□□□□□ -0.1
TNFP01375 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TNFP01375 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TNFP01375 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.45□□□□□ -0.1
TNFP01375 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.45□□□□□ -0.1
TNFP01375 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
TNFP01375 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.45□□□□□ -0.1
TNFP01375 AC091812.3-201ENST00000621362 345 ntBASIC14.45□□□□□ -0.1
TNFP01375 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFP01375 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFP01375 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFP01375 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.45□□□□□ -0.1
TNFP01375 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFP01375 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFP01375 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TNFP01375 AC008132.1-202ENST00000342005 1389 ntBASIC14.45□□□□□ -0.1
TNFP01375 FAM90A7P-201ENST00000382628 1395 ntBASIC14.45□□□□□ -0.1
TNFP01375 FAM90A23P-201ENST00000400136 1395 ntBASIC14.45□□□□□ -0.1
TNFP01375 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.45□□□□□ -0.1
TNFP01375 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFP01375 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.45□□□□□ -0.1
TNFP01375 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFP01375 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFP01375 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TNFP01375 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.44□□□□□ -0.1
TNFP01375 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 AC136759.1-202ENST00000530858 2194 ntBASIC14.44□□□□□ -0.1
TNFP01375 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.44□□□□□ -0.1
TNFP01375 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.44□□□□□ -0.1
TNFP01375 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.44□□□□□ -0.1
TNFP01375 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 AC013726.1-201ENST00000563747 2285 ntBASIC14.44□□□□□ -0.1
TNFP01375 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TNFP01375 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.44□□□□□ -0.1
TNFP01375 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
TNFP01375 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.44□□□□□ -0.1
TNFP01375 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TNFP01375 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TNFP01375 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.44□□□□□ -0.1
TNFP01375 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 ACTG1P2-201ENST00000415776 1125 ntBASIC14.44□□□□□ -0.1
TNFP01375 ACTG1P11-201ENST00000425411 1125 ntBASIC14.44□□□□□ -0.1
TNFP01375 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.44□□□□□ -0.1
TNFP01375 AL645933.1-201ENST00000440087 609 ntBASIC14.44□□□□□ -0.1
TNFP01375 AC012618.1-201ENST00000461223 412 ntBASIC14.44□□□□□ -0.1
TNFP01375 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.44□□□□□ -0.1
TNFP01375 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 AC024681.1-201ENST00000521917 487 ntBASIC14.44□□□□□ -0.1
TNFP01375 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.44□□□□□ -0.1
TNFP01375 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.44□□□□□ -0.1
TNFP01375 AC090857.1-201ENST00000527400 390 ntBASIC14.44□□□□□ -0.1
TNFP01375 AL161670.2-201ENST00000557650 1227 ntBASIC14.44□□□□□ -0.1
TNFP01375 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.44□□□□□ -0.1
TNFP01375 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.44□□□□□ -0.1
TNFP01375 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.44□□□□□ -0.1
TNFP01375 AC097724.1-201ENST00000609581 426 ntBASIC14.44□□□□□ -0.1
TNFP01375 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 AC144522.1-201ENST00000625111 1658 ntBASIC14.44□□□□□ -0.1
TNFP01375 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TNFP01375 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TNFP01375 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TNFP01375 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.44□□□□□ -0.1
TNFP01375 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.44□□□□□ -0.1
TNFP01375 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.43□□□□□ -0.1
TNFP01375 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TNFP01375 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms