Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.49□□□□□ -0.25
PPP1R3DO95685 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.49□□□□□ -0.25
PPP1R3DO95685 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PPP1R3DO95685 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.49□□□□□ -0.25
PPP1R3DO95685 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.49□□□□□ -0.25
PPP1R3DO95685 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.49□□□□□ -0.25
PPP1R3DO95685 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.49□□□□□ -0.25
PPP1R3DO95685 AC104596.2-201ENST00000512793 793 ntBASIC13.49□□□□□ -0.25
PPP1R3DO95685 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.49□□□□□ -0.25
PPP1R3DO95685 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.49□□□□□ -0.25
PPP1R3DO95685 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.49□□□□□ -0.25
PPP1R3DO95685 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.49□□□□□ -0.25
PPP1R3DO95685 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.49□□□□□ -0.25
PPP1R3DO95685 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PPP1R3DO95685 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.49□□□□□ -0.25
PPP1R3DO95685 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PPP1R3DO95685 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
PPP1R3DO95685 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PPP1R3DO95685 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.49□□□□□ -0.25
PPP1R3DO95685 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.49□□□□□ -0.25
PPP1R3DO95685 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PPP1R3DO95685 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PPP1R3DO95685 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PPP1R3DO95685 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
PPP1R3DO95685 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PPP1R3DO95685 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PPP1R3DO95685 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PPP1R3DO95685 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.49□□□□□ -0.25
PPP1R3DO95685 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.49□□□□□ -0.25
PPP1R3DO95685 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.49□□□□□ -0.25
PPP1R3DO95685 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
PPP1R3DO95685 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
PPP1R3DO95685 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PPP1R3DO95685 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 PTENP1-202ENST00000532280 3996 ntBASIC13.48□□□□□ -0.25
PPP1R3DO95685 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 AC055876.2-201ENST00000531834 546 ntBASIC13.48□□□□□ -0.25
PPP1R3DO95685 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 AC012617.1-204ENST00000586340 2305 ntBASIC13.48□□□□□ -0.25
PPP1R3DO95685 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 BEND3P1-201ENST00000421591 1944 ntBASIC13.48□□□□□ -0.25
PPP1R3DO95685 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
PPP1R3DO95685 SALL4P5-201ENST00000419001 1760 ntBASIC13.48□□□□□ -0.25
PPP1R3DO95685 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PPP1R3DO95685 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PPP1R3DO95685 KRT8P22-201ENST00000562317 1415 ntBASIC13.47□□□□□ -0.25
PPP1R3DO95685 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PPP1R3DO95685 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
PPP1R3DO95685 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
PPP1R3DO95685 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
PPP1R3DO95685 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms