Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.34□□□□□ -0.27
CDRT1O95170 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.34□□□□□ -0.27
CDRT1O95170 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDRT1O95170 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDRT1O95170 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.34□□□□□ -0.27
CDRT1O95170 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDRT1O95170 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDRT1O95170 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.34□□□□□ -0.27
CDRT1O95170 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.34□□□□□ -0.27
CDRT1O95170 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.34□□□□□ -0.27
CDRT1O95170 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.34□□□□□ -0.27
CDRT1O95170 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.34□□□□□ -0.27
CDRT1O95170 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDRT1O95170 MEX3B-202ENST00000558133 4333 ntBASIC13.34□□□□□ -0.27
CDRT1O95170 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDRT1O95170 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDRT1O95170 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDRT1O95170 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDRT1O95170 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CDRT1O95170 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDRT1O95170 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDRT1O95170 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
CDRT1O95170 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDRT1O95170 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CDRT1O95170 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.34□□□□□ -0.27
CDRT1O95170 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDRT1O95170 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
CDRT1O95170 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDRT1O95170 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.34□□□□□ -0.27
CDRT1O95170 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.34□□□□□ -0.27
CDRT1O95170 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.34□□□□□ -0.27
CDRT1O95170 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDRT1O95170 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
CDRT1O95170 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CDRT1O95170 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CDRT1O95170 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CDRT1O95170 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
CDRT1O95170 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CDRT1O95170 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 AC114271.1-201ENST00000612689 2813 ntBASIC13.33□□□□□ -0.28
CDRT1O95170 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
CDRT1O95170 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
CDRT1O95170 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CDRT1O95170 FO393414.2-201ENST00000405153 598 ntBASIC13.33□□□□□ -0.28
CDRT1O95170 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.33□□□□□ -0.28
CDRT1O95170 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.33□□□□□ -0.28
CDRT1O95170 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.33□□□□□ -0.28
CDRT1O95170 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.33□□□□□ -0.28
CDRT1O95170 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.33□□□□□ -0.28
CDRT1O95170 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CDRT1O95170 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.33□□□□□ -0.28
CDRT1O95170 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CDRT1O95170 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 AC020910.6-201ENST00000623084 1459 ntBASIC13.33□□□□□ -0.28
CDRT1O95170 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.33□□□□□ -0.28
CDRT1O95170 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.33□□□□□ -0.28
CDRT1O95170 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.33□□□□□ -0.28
CDRT1O95170 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.33□□□□□ -0.28
CDRT1O95170 AC004241.5-201ENST00000623870 2448 ntBASIC13.33□□□□□ -0.28
CDRT1O95170 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.33□□□□□ -0.28
CDRT1O95170 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CDRT1O95170 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.33□□□□□ -0.28
CDRT1O95170 AC111170.3-201ENST00000624282 2464 ntBASIC13.33□□□□□ -0.28
CDRT1O95170 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDRT1O95170 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.33□□□□□ -0.28
CDRT1O95170 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.32□□□□□ -0.28
CDRT1O95170 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CDRT1O95170 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CDRT1O95170 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.32□□□□□ -0.28
CDRT1O95170 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.32□□□□□ -0.28
CDRT1O95170 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.32□□□□□ -0.28
CDRT1O95170 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms