Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC244250.3-201ENST00000620749 366 ntBASIC19.11■□□□□ 0.65
LTN1O94822 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LTN1O94822 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC19.11■□□□□ 0.65
LTN1O94822 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.11■□□□□ 0.65
LTN1O94822 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC19.11■□□□□ 0.65
LTN1O94822 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LTN1O94822 AC132872.4-202ENST00000622924 2756 ntBASIC19.11■□□□□ 0.65
LTN1O94822 AC215219.1-201ENST00000400706 1817 ntBASIC19.1■□□□□ 0.65
LTN1O94822 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
LTN1O94822 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC19.1■□□□□ 0.65
LTN1O94822 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC19.1■□□□□ 0.65
LTN1O94822 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LTN1O94822 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.1■□□□□ 0.65
LTN1O94822 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LTN1O94822 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LTN1O94822 NHP2-202ENST00000314397 599 ntTSL 2 BASIC19.1■□□□□ 0.65
LTN1O94822 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LTN1O94822 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC19.1■□□□□ 0.65
LTN1O94822 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC19.1■□□□□ 0.65
LTN1O94822 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
LTN1O94822 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC19.1■□□□□ 0.65
LTN1O94822 FO393412.1-201ENST00000619841 382 ntBASIC19.1■□□□□ 0.65
LTN1O94822 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LTN1O94822 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC19.1■□□□□ 0.65
LTN1O94822 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LTN1O94822 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.1■□□□□ 0.65
LTN1O94822 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC19.1■□□□□ 0.65
LTN1O94822 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
LTN1O94822 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LTN1O94822 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC19.1■□□□□ 0.65
LTN1O94822 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.09■□□□□ 0.65
LTN1O94822 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC19.09■□□□□ 0.65
LTN1O94822 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC19.09■□□□□ 0.65
LTN1O94822 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC19.09■□□□□ 0.65
LTN1O94822 RPS23-207ENST00000511844 530 ntTSL 2 BASIC19.09■□□□□ 0.65
LTN1O94822 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC19.09■□□□□ 0.65
LTN1O94822 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 RN7SL455P-201ENST00000580629 282 ntBASIC19.09■□□□□ 0.65
LTN1O94822 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC19.09■□□□□ 0.65
LTN1O94822 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LTN1O94822 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
LTN1O94822 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LTN1O94822 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC19.09■□□□□ 0.65
LTN1O94822 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LTN1O94822 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC19.09■□□□□ 0.65
LTN1O94822 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC19.09■□□□□ 0.65
LTN1O94822 PPOX-204ENST00000462866 473 ntTSL 5 BASIC19.09■□□□□ 0.65
LTN1O94822 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC19.09■□□□□ 0.65
LTN1O94822 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LTN1O94822 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC19.09■□□□□ 0.65
LTN1O94822 CTBP2P8-201ENST00000422584 1330 ntBASIC19.08■□□□□ 0.65
LTN1O94822 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LTN1O94822 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC19.08■□□□□ 0.65
LTN1O94822 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LTN1O94822 FTX-216ENST00000638985 1367 ntTSL 5 BASIC19.08■□□□□ 0.65
LTN1O94822 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
LTN1O94822 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LTN1O94822 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LTN1O94822 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
LTN1O94822 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC19.08■□□□□ 0.65
LTN1O94822 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LTN1O94822 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
LTN1O94822 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
LTN1O94822 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
LTN1O94822 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LTN1O94822 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LTN1O94822 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LTN1O94822 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
LTN1O94822 COX20P1-201ENST00000366529 357 ntBASIC19.08■□□□□ 0.64
LTN1O94822 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LTN1O94822 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
LTN1O94822 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC19.08■□□□□ 0.64
LTN1O94822 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC19.08■□□□□ 0.64
LTN1O94822 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LTN1O94822 CHCHD2P2-201ENST00000503744 321 ntBASIC19.08■□□□□ 0.64
LTN1O94822 RNA5SP406-201ENST00000516106 112 ntBASIC19.08■□□□□ 0.64
LTN1O94822 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC19.08■□□□□ 0.64
LTN1O94822 AC013553.1-201ENST00000560906 267 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms