Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.2□□□□□ -0.46
SSSCA1O60232 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.2□□□□□ -0.46
SSSCA1O60232 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.2□□□□□ -0.46
SSSCA1O60232 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 AC074044.1-201ENST00000609673 707 ntBASIC12.2□□□□□ -0.46
SSSCA1O60232 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.2□□□□□ -0.46
SSSCA1O60232 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SSSCA1O60232 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.2□□□□□ -0.46
SSSCA1O60232 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SSSCA1O60232 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
SSSCA1O60232 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.2□□□□□ -0.46
SSSCA1O60232 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
SSSCA1O60232 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.2□□□□□ -0.46
SSSCA1O60232 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SSSCA1O60232 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSSCA1O60232 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.2□□□□□ -0.46
SSSCA1O60232 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.19□□□□□ -0.46
SSSCA1O60232 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 AC023794.5-201ENST00000564380 2157 ntBASIC12.19□□□□□ -0.46
SSSCA1O60232 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.19□□□□□ -0.46
SSSCA1O60232 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
SSSCA1O60232 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 RPL13AP23-201ENST00000480739 586 ntBASIC12.19□□□□□ -0.46
SSSCA1O60232 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.19□□□□□ -0.46
SSSCA1O60232 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.19□□□□□ -0.46
SSSCA1O60232 ALG1L8P-201ENST00000533887 760 ntBASIC12.19□□□□□ -0.46
SSSCA1O60232 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.19□□□□□ -0.46
SSSCA1O60232 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.19□□□□□ -0.46
SSSCA1O60232 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SSSCA1O60232 SLC25A6P4-201ENST00000586535 553 ntBASIC12.19□□□□□ -0.46
SSSCA1O60232 RN7SL828P-201ENST00000607615 303 ntBASIC12.19□□□□□ -0.46
SSSCA1O60232 AL133215.2-201ENST00000609242 977 ntBASIC12.19□□□□□ -0.46
SSSCA1O60232 MIR6069-201ENST00000620069 79 ntBASIC12.19□□□□□ -0.46
SSSCA1O60232 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.19□□□□□ -0.46
SSSCA1O60232 AF228730.6-201ENST00000641497 218 ntBASIC12.19□□□□□ -0.46
SSSCA1O60232 AC084121.3-201ENST00000641716 218 ntBASIC12.19□□□□□ -0.46
SSSCA1O60232 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SSSCA1O60232 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.19□□□□□ -0.46
SSSCA1O60232 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SSSCA1O60232 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SSSCA1O60232 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSSCA1O60232 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SSSCA1O60232 REXO1L1P-201ENST00000379010 6598 ntBASIC12.18□□□□□ -0.46
SSSCA1O60232 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SSSCA1O60232 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
SSSCA1O60232 HLA-A-201ENST00000376802 1334 ntBASIC12.18□□□□□ -0.46
SSSCA1O60232 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SSSCA1O60232 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SSSCA1O60232 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.18□□□□□ -0.46
SSSCA1O60232 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SSSCA1O60232 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.18□□□□□ -0.46
SSSCA1O60232 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSSCA1O60232 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms