Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AL512604.3-201ENST00000569583 964 ntBASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 FAM198B-202ENST00000393807 4544 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 PPP2R1A-205ENST00000462990 2730 ntTSL 2 BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 SATB1-204ENST00000417717 4589 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 FAM160A1-201ENST00000435205 4576 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 AC243591.1-201ENST00000452967 1364 ntBASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 CTSC-203ENST00000524463 6125 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 PKP2-202ENST00000340811 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 CNGB1-204ENST00000564448 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 PIGO-202ENST00000361778 2464 ntTSL 5 BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 SORBS3-201ENST00000240123 3459 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
CHKB-CPT1BH3BT56 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 SHOX-203ENST00000381578 3757 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 SEC14L2-214ENST00000615189 4382 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 UBOX5-202ENST00000348031 4469 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 EXD2-201ENST00000312994 5107 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 N6AMT1-202ENST00000351429 4781 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 AC008806.1-201ENST00000624962 2443 ntBASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 MMP23A-201ENST00000234610 1017 ntBASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 SERF2-207ENST00000409614 582 ntTSL 2 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 GXYLT1P6-201ENST00000456472 1187 ntBASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 UNC93B5-201ENST00000530315 699 ntBASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 AP003097.1-201ENST00000530657 1135 ntBASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 MPDU1-223ENST00000582151 728 ntBASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 AMT-239ENST00000636865 1914 ntTSL 5 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 PMEPA1-205ENST00000395816 4519 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 AC007608.3-201ENST00000570167 5214 ntTSL 2 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 EMC1-207ENST00000477853 6664 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 BTG1-201ENST00000256015 4680 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 CICP18-201ENST00000406017 2812 ntBASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 WASH6P-202ENST00000359512 1437 ntBASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 SRC-203ENST00000373567 4321 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CHKB-CPT1BH3BT56 NCDN-202ENST00000373243 3683 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms