Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 AL356000.1-201ENST00000441073 1238 ntBASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 HNRNPA1P56-201ENST00000505767 954 ntBASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 AC087203.1-201ENST00000532111 1181 ntBASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88BA6NKF7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 AL590440.2-201ENST00000641973 1595 ntBASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 AC092903.1-201ENST00000466506 262 ntBASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 DLK1-205ENST00000556051 469 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 AC005777.1-201ENST00000588332 187 ntBASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TMEM88BA6NKF7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 OR52M2P-201ENST00000414298 959 ntBASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 AC138761.6-201ENST00000583997 1423 ntBASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TMEM88BA6NKF7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms