Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.77□□□□□ -0.37
TMEM235A6NFC5 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 PEG13-201ENST00000631594 5667 ntBASIC12.77□□□□□ -0.37
TMEM235A6NFC5 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM235A6NFC5 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 SPDYE7P-202ENST00000420373 878 ntBASIC12.76□□□□□ -0.37
TMEM235A6NFC5 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 FDX1P1-201ENST00000449115 551 ntBASIC12.76□□□□□ -0.37
TMEM235A6NFC5 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 RN7SL618P-201ENST00000477850 296 ntBASIC12.76□□□□□ -0.37
TMEM235A6NFC5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 PGAM5P1-201ENST00000518923 814 ntBASIC12.76□□□□□ -0.37
TMEM235A6NFC5 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 AC004461.2-201ENST00000629517 803 ntBASIC12.76□□□□□ -0.37
TMEM235A6NFC5 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 AC020910.6-201ENST00000623084 1459 ntBASIC12.76□□□□□ -0.37
TMEM235A6NFC5 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.76□□□□□ -0.37
TMEM235A6NFC5 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM235A6NFC5 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
TMEM235A6NFC5 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM235A6NFC5 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM235A6NFC5 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.75□□□□□ -0.37
TMEM235A6NFC5 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM235A6NFC5 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM235A6NFC5 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM235A6NFC5 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM235A6NFC5 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM235A6NFC5 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
TMEM235A6NFC5 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM235A6NFC5 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM235A6NFC5 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TMEM235A6NFC5 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms