Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 AC011840.2-201ENST00000563063 1520 ntBASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCDC162PA2VCL2 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 AC020910.5-201ENST00000623668 1865 ntBASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 NME2P1-201ENST00000426182 414 ntBASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 AC022447.6-201ENST00000515522 438 ntBASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 AC233724.13-201ENST00000598383 410 ntBASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 AC105233.6-201ENST00000642093 218 ntBASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CCDC162PA2VCL2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 TPM3P8-201ENST00000330554 643 ntBASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 TPT1P11-201ENST00000458482 498 ntBASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 AL391280.1-201ENST00000506969 1062 ntBASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 AC131206.1-201ENST00000538078 1211 ntBASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 BTNL10-201ENST00000595971 695 ntBASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 ECM1P1-201ENST00000604092 1279 ntBASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 AC138696.2-201ENST00000607376 223 ntBASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 AC132938.4-201ENST00000623835 848 ntBASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 AC015802.1-201ENST00000588104 1449 ntBASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 FKBP4P6-201ENST00000457486 1332 ntBASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CCDC162PA2VCL2 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms