Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 FAM58CP-201ENST00000435741 640 ntBASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 KRT18P43-201ENST00000469825 1281 ntBASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 KRT18P56-201ENST00000507275 550 ntBASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 KRT8P24-201ENST00000560290 1559 ntBASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
KCNIP3Q9Y2W7 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 TCAM1P-207ENST00000485295 1537 ntBASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 INE2-201ENST00000630399 1874 ntBASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 AC016397.2-201ENST00000624848 1985 ntBASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 AL592309.1-201ENST00000443127 649 ntBASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 RN7SL510P-201ENST00000581311 263 ntBASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 AC018529.1-201ENST00000613063 361 ntBASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 AC092865.6-201ENST00000642101 219 ntBASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 Z82170.1-201ENST00000625081 3192 ntBASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
KCNIP3Q9Y2W7 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms