Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 AL353705.2-201ENST00000428243 662 ntBASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 REXO1L4P-201ENST00000605109 1937 ntBASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 AC018442.1-201ENST00000421439 2061 ntBASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC11.74□□□□□ -0.53
RPH3ALQ9UNE2 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 AC079140.1-201ENST00000508039 487 ntBASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.73□□□□□ -0.53
RPH3ALQ9UNE2 RNA5SP419-201ENST00000515908 135 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms