Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 AC011742.3-201ENST00000439053 820 ntBASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 RERG-205ENST00000537647 935 ntTSL 2 BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 AL591471.1-201ENST00000621855 229 ntBASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 AL805961.1-203ENST00000641078 1258 ntBASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 AP002353.1-201ENST00000528257 1599 ntBASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 TUBB8P4-201ENST00000511806 1324 ntBASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPC1L1Q9UHC9 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 MEG3_2.1-201ENST00000611456 105 ntBASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPC1L1Q9UHC9 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 KRT8P21-201ENST00000430398 1491 ntBASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 EIF4HP1-201ENST00000453115 687 ntBASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 KLK3-207ENST00000595952 969 ntTSL 3 BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 NDUFV2P1-201ENST00000596415 907 ntBASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 GPR182-203ENST00000622922 591 ntBASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 AL139099.5-201ENST00000635274 300 ntBASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NPC1L1Q9UHC9 AC016397.2-201ENST00000624848 1985 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms