Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 AC133552.6-201ENST00000613406 534 ntBASIC13.99□□□□□ -0.17
CNIH4Q9P003 MIR6752-201ENST00000618442 71 ntBASIC13.99□□□□□ -0.17
CNIH4Q9P003 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.99□□□□□ -0.17
CNIH4Q9P003 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CNIH4Q9P003 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CNIH4Q9P003 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.99□□□□□ -0.17
CNIH4Q9P003 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNIH4Q9P003 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNIH4Q9P003 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CNIH4Q9P003 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CNIH4Q9P003 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNIH4Q9P003 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
CNIH4Q9P003 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNIH4Q9P003 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNIH4Q9P003 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNIH4Q9P003 PDIA3P1-201ENST00000471856 1510 ntBASIC13.99□□□□□ -0.17
CNIH4Q9P003 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CNIH4Q9P003 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.99□□□□□ -0.17
CNIH4Q9P003 AC018442.1-201ENST00000421439 2061 ntBASIC13.99□□□□□ -0.17
CNIH4Q9P003 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNIH4Q9P003 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNIH4Q9P003 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNIH4Q9P003 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNIH4Q9P003 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNIH4Q9P003 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNIH4Q9P003 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNIH4Q9P003 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNIH4Q9P003 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNIH4Q9P003 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNIH4Q9P003 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNIH4Q9P003 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.98□□□□□ -0.17
CNIH4Q9P003 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNIH4Q9P003 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNIH4Q9P003 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNIH4Q9P003 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNIH4Q9P003 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNIH4Q9P003 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNIH4Q9P003 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNIH4Q9P003 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CNIH4Q9P003 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CNIH4Q9P003 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 AC113367.3-201ENST00000508316 1912 ntBASIC13.98□□□□□ -0.17
CNIH4Q9P003 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CNIH4Q9P003 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNIH4Q9P003 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNIH4Q9P003 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNIH4Q9P003 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CNIH4Q9P003 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CNIH4Q9P003 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNIH4Q9P003 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CNIH4Q9P003 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNIH4Q9P003 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNIH4Q9P003 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.97□□□□□ -0.17
CNIH4Q9P003 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CNIH4Q9P003 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNIH4Q9P003 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CNIH4Q9P003 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNIH4Q9P003 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CNIH4Q9P003 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNIH4Q9P003 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNIH4Q9P003 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNIH4Q9P003 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNIH4Q9P003 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CNIH4Q9P003 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CNIH4Q9P003 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.97□□□□□ -0.17
CNIH4Q9P003 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
CNIH4Q9P003 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.97□□□□□ -0.17
CNIH4Q9P003 CTBP2P5-201ENST00000454986 1264 ntBASIC13.97□□□□□ -0.17
CNIH4Q9P003 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.97□□□□□ -0.17
CNIH4Q9P003 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.97□□□□□ -0.17
CNIH4Q9P003 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.97□□□□□ -0.17
CNIH4Q9P003 RN7SL48P-201ENST00000579283 293 ntBASIC13.97□□□□□ -0.17
CNIH4Q9P003 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.97□□□□□ -0.17
CNIH4Q9P003 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.97□□□□□ -0.17
CNIH4Q9P003 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms