Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.64■□□□□ 0.25
CBX8Q9HC52 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.64■□□□□ 0.25
CBX8Q9HC52 AC026410.3-201ENST00000514280 936 ntBASIC16.64■□□□□ 0.25
CBX8Q9HC52 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.64■□□□□ 0.25
CBX8Q9HC52 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CBX8Q9HC52 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CBX8Q9HC52 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.64■□□□□ 0.25
CBX8Q9HC52 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CBX8Q9HC52 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CBX8Q9HC52 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBX8Q9HC52 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC16.64■□□□□ 0.25
CBX8Q9HC52 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBX8Q9HC52 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBX8Q9HC52 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBX8Q9HC52 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.64■□□□□ 0.25
CBX8Q9HC52 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CBX8Q9HC52 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBX8Q9HC52 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CBX8Q9HC52 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBX8Q9HC52 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.64■□□□□ 0.25
CBX8Q9HC52 AC068760.1-201ENST00000493579 1953 ntBASIC16.64■□□□□ 0.25
CBX8Q9HC52 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBX8Q9HC52 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CBX8Q9HC52 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC16.64■□□□□ 0.25
CBX8Q9HC52 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CBX8Q9HC52 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CBX8Q9HC52 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CBX8Q9HC52 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 AL157996.1-201ENST00000624684 2299 ntBASIC16.63■□□□□ 0.25
CBX8Q9HC52 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC16.63■□□□□ 0.25
CBX8Q9HC52 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.63■□□□□ 0.25
CBX8Q9HC52 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.63■□□□□ 0.25
CBX8Q9HC52 DNAJB3-201ENST00000446806 729 ntBASIC16.63■□□□□ 0.25
CBX8Q9HC52 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.63■□□□□ 0.25
CBX8Q9HC52 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.63■□□□□ 0.25
CBX8Q9HC52 AC026434.2-201ENST00000506094 1078 ntBASIC16.63■□□□□ 0.25
CBX8Q9HC52 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.63■□□□□ 0.25
CBX8Q9HC52 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CBX8Q9HC52 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.63■□□□□ 0.25
CBX8Q9HC52 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.63■□□□□ 0.25
CBX8Q9HC52 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 AL844908.2-201ENST00000609461 460 ntBASIC16.63■□□□□ 0.25
CBX8Q9HC52 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.63■□□□□ 0.25
CBX8Q9HC52 AC019294.4-201ENST00000561777 2905 ntBASIC16.63■□□□□ 0.25
CBX8Q9HC52 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CBX8Q9HC52 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC16.63■□□□□ 0.25
CBX8Q9HC52 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 SLC6A6P1-201ENST00000413933 1850 ntBASIC16.63■□□□□ 0.25
CBX8Q9HC52 AL591122.2-201ENST00000624125 1853 ntBASIC16.63■□□□□ 0.25
CBX8Q9HC52 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
CBX8Q9HC52 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CBX8Q9HC52 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.62■□□□□ 0.25
CBX8Q9HC52 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CBX8Q9HC52 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CBX8Q9HC52 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CBX8Q9HC52 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX8Q9HC52 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CBX8Q9HC52 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CBX8Q9HC52 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX8Q9HC52 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.62■□□□□ 0.25
CBX8Q9HC52 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.62■□□□□ 0.25
CBX8Q9HC52 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX8Q9HC52 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX8Q9HC52 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.62■□□□□ 0.25
CBX8Q9HC52 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX8Q9HC52 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CBX8Q9HC52 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CBX8Q9HC52 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.62■□□□□ 0.25
CBX8Q9HC52 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX8Q9HC52 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX8Q9HC52 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CBX8Q9HC52 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CBX8Q9HC52 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CBX8Q9HC52 AL139400.1-201ENST00000366220 510 ntBASIC16.62■□□□□ 0.25
CBX8Q9HC52 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.62■□□□□ 0.25
CBX8Q9HC52 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.62■□□□□ 0.25
CBX8Q9HC52 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms