Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 AC012508.2-201ENST00000567613 1472 ntBASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
CHRDL1Q9BU40 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 AC104457.1-201ENST00000401024 814 ntBASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 GNAQP1-201ENST00000444815 1067 ntBASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 TMPRSS11CP-201ENST00000453277 683 ntBASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 DOC2GP-202ENST00000514950 1163 ntBASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 TPRX2P-201ENST00000535362 881 ntBASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 AC023310.3-201ENST00000557027 670 ntBASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 AC100756.1-201ENST00000562736 682 ntBASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 AC138749.3-201ENST00000567691 622 ntBASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 NAA60-208ENST00000570819 833 ntTSL 2 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 AC011467.4-201ENST00000594891 528 ntBASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 AC116165.1-201ENST00000611806 668 ntBASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CHRDL1Q9BU40 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 SLC9A7P1-202ENST00000556476 2239 ntBASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CHRDL1Q9BU40 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms