Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC11.64□□□□□ -0.55
TRGV9Q99603 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC11.64□□□□□ -0.55
TRGV9Q99603 SERF2-209ENST00000409646 559 ntTSL 4 BASIC11.64□□□□□ -0.55
TRGV9Q99603 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC11.64□□□□□ -0.55
TRGV9Q99603 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 AC004890.2-204ENST00000481968 304 ntBASIC11.64□□□□□ -0.55
TRGV9Q99603 DOC2GP-202ENST00000514950 1163 ntBASIC11.64□□□□□ -0.55
TRGV9Q99603 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC11.64□□□□□ -0.55
TRGV9Q99603 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
TRGV9Q99603 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC11.64□□□□□ -0.55
TRGV9Q99603 CALM1-205ENST00000553542 877 ntTSL 5 BASIC11.64□□□□□ -0.55
TRGV9Q99603 AC104794.3-201ENST00000566840 1248 ntBASIC11.64□□□□□ -0.55
TRGV9Q99603 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC11.64□□□□□ -0.55
TRGV9Q99603 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC11.64□□□□□ -0.55
TRGV9Q99603 AL390754.1-201ENST00000619088 582 ntBASIC11.64□□□□□ -0.55
TRGV9Q99603 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC11.64□□□□□ -0.55
TRGV9Q99603 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
TRGV9Q99603 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.64□□□□□ -0.55
TRGV9Q99603 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.64□□□□□ -0.55
TRGV9Q99603 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC11.64□□□□□ -0.55
TRGV9Q99603 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
TRGV9Q99603 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
TRGV9Q99603 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.63□□□□□ -0.55
TRGV9Q99603 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
TRGV9Q99603 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.63□□□□□ -0.55
TRGV9Q99603 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 ADAMTS7P1-201ENST00000613213 4793 ntBASIC11.63□□□□□ -0.55
TRGV9Q99603 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 C1QBPP1-201ENST00000400117 770 ntBASIC11.63□□□□□ -0.55
TRGV9Q99603 MIR1233-2-201ENST00000408138 82 ntBASIC11.63□□□□□ -0.55
TRGV9Q99603 MIR1233-1-201ENST00000408722 82 ntBASIC11.63□□□□□ -0.55
TRGV9Q99603 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.63□□□□□ -0.55
TRGV9Q99603 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC11.63□□□□□ -0.55
TRGV9Q99603 AC104596.2-201ENST00000512793 793 ntBASIC11.63□□□□□ -0.55
TRGV9Q99603 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
TRGV9Q99603 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC11.63□□□□□ -0.55
TRGV9Q99603 AC023310.3-201ENST00000557027 670 ntBASIC11.63□□□□□ -0.55
TRGV9Q99603 RPL28-205ENST00000558131 444 ntTSL 5 BASIC11.63□□□□□ -0.55
TRGV9Q99603 AC100756.1-201ENST00000562736 682 ntBASIC11.63□□□□□ -0.55
TRGV9Q99603 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC11.63□□□□□ -0.55
TRGV9Q99603 AC138749.3-201ENST00000567691 622 ntBASIC11.63□□□□□ -0.55
TRGV9Q99603 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.63□□□□□ -0.55
TRGV9Q99603 SPDYE22P-201ENST00000582158 798 ntBASIC11.63□□□□□ -0.55
TRGV9Q99603 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.63□□□□□ -0.55
TRGV9Q99603 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC11.63□□□□□ -0.55
TRGV9Q99603 AC116165.1-201ENST00000611806 668 ntBASIC11.63□□□□□ -0.55
TRGV9Q99603 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC11.63□□□□□ -0.55
TRGV9Q99603 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
TRGV9Q99603 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC11.63□□□□□ -0.55
TRGV9Q99603 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC11.63□□□□□ -0.55
TRGV9Q99603 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
TRGV9Q99603 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 AC003102.2-201ENST00000589195 1469 ntBASIC11.63□□□□□ -0.55
TRGV9Q99603 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
TRGV9Q99603 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TRGV9Q99603 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms