Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GAFA1Q96PS6 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 AGGF1P1-201ENST00000509500 2073 ntBASIC12.35□□□□□ -0.43
GAFA1Q96PS6 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 BNIP3P42-201ENST00000454982 569 ntBASIC12.35□□□□□ -0.43
GAFA1Q96PS6 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 BNIP3P29-201ENST00000598302 571 ntBASIC12.35□□□□□ -0.43
GAFA1Q96PS6 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 AC011447.5-201ENST00000616168 564 ntBASIC12.35□□□□□ -0.43
GAFA1Q96PS6 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GAFA1Q96PS6 AP001267.2-201ENST00000532619 2086 ntBASIC12.34□□□□□ -0.43
GAFA1Q96PS6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 ANKRD26P3-201ENST00000454044 2748 ntBASIC12.34□□□□□ -0.43
GAFA1Q96PS6 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 AC015688.4-201ENST00000580780 1647 ntBASIC12.34□□□□□ -0.43
GAFA1Q96PS6 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 DUX4L45-201ENST00000566406 1057 ntBASIC12.34□□□□□ -0.43
GAFA1Q96PS6 MIR4741-201ENST00000579822 90 ntBASIC12.34□□□□□ -0.43
GAFA1Q96PS6 AL136301.1-201ENST00000615830 422 ntBASIC12.34□□□□□ -0.43
GAFA1Q96PS6 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
GAFA1Q96PS6 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms