Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 AL390754.1-201ENST00000619088 582 ntBASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 AC215219.1-201ENST00000400706 1817 ntBASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.28■□□□□ 0.36
CHAMP1Q96JM3 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 AL359881.3-201ENST00000602640 1721 ntBASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 MRPS18AP1-201ENST00000414458 589 ntBASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 DUX4L47-201ENST00000566374 394 ntBASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 AL390955.2-201ENST00000603032 514 ntBASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHAMP1Q96JM3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CHAMP1Q96JM3 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC17.27■□□□□ 0.35
CHAMP1Q96JM3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CHAMP1Q96JM3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHAMP1Q96JM3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHAMP1Q96JM3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.27■□□□□ 0.35
CHAMP1Q96JM3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 EIF3FP3-201ENST00000434851 1086 ntBASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 GAPDHP21-201ENST00000450301 1010 ntBASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 AC025678.2-201ENST00000562061 970 ntBASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 AL158211.3-201ENST00000607385 239 ntBASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 MIR6752-201ENST00000618442 71 ntBASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 AJ011932.1-201ENST00000621707 465 ntBASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 MYADML-201ENST00000474610 2147 ntBASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHAMP1Q96JM3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHAMP1Q96JM3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms