Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.7□□□□□ -0.38
USP9XQ93008 AP000845.1-201ENST00000581677 2131 ntBASIC12.7□□□□□ -0.38
USP9XQ93008 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.7□□□□□ -0.38
USP9XQ93008 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
USP9XQ93008 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.7□□□□□ -0.38
USP9XQ93008 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
USP9XQ93008 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
USP9XQ93008 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.7□□□□□ -0.38
USP9XQ93008 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
USP9XQ93008 RN7SL602P-201ENST00000578326 324 ntBASIC12.7□□□□□ -0.38
USP9XQ93008 RN7SL718P-201ENST00000581254 303 ntBASIC12.7□□□□□ -0.38
USP9XQ93008 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
USP9XQ93008 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
USP9XQ93008 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.69□□□□□ -0.38
USP9XQ93008 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.69□□□□□ -0.38
USP9XQ93008 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
USP9XQ93008 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
USP9XQ93008 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
USP9XQ93008 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC12.69□□□□□ -0.38
USP9XQ93008 AC098657.1-201ENST00000416270 1135 ntBASIC12.69□□□□□ -0.38
USP9XQ93008 PGAM1P11-201ENST00000416729 680 ntBASIC12.69□□□□□ -0.38
USP9XQ93008 AHCYP3-201ENST00000420053 1279 ntBASIC12.69□□□□□ -0.38
USP9XQ93008 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC12.69□□□□□ -0.38
USP9XQ93008 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.69□□□□□ -0.38
USP9XQ93008 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.69□□□□□ -0.38
USP9XQ93008 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC12.69□□□□□ -0.38
USP9XQ93008 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.69□□□□□ -0.38
USP9XQ93008 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.69□□□□□ -0.38
USP9XQ93008 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.69□□□□□ -0.38
USP9XQ93008 AC006372.4-201ENST00000624122 1543 ntBASIC12.69□□□□□ -0.38
USP9XQ93008 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC12.69□□□□□ -0.38
USP9XQ93008 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
USP9XQ93008 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 PIFO-201ENST00000369737 746 ntTSL 2 BASIC12.69□□□□□ -0.38
USP9XQ93008 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC12.69□□□□□ -0.38
USP9XQ93008 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.69□□□□□ -0.38
USP9XQ93008 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.69□□□□□ -0.38
USP9XQ93008 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC12.69□□□□□ -0.38
USP9XQ93008 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
USP9XQ93008 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
USP9XQ93008 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
USP9XQ93008 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.68□□□□□ -0.38
USP9XQ93008 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
USP9XQ93008 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.68□□□□□ -0.38
USP9XQ93008 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
USP9XQ93008 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.68□□□□□ -0.38
USP9XQ93008 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
USP9XQ93008 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.68□□□□□ -0.38
USP9XQ93008 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.68□□□□□ -0.38
USP9XQ93008 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
USP9XQ93008 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
USP9XQ93008 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC12.68□□□□□ -0.38
USP9XQ93008 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC12.68□□□□□ -0.38
USP9XQ93008 RN7SL147P-201ENST00000487345 298 ntBASIC12.68□□□□□ -0.38
USP9XQ93008 CASP3-205ENST00000517513 964 ntTSL 5 BASIC12.68□□□□□ -0.38
USP9XQ93008 URB1-AS1-201ENST00000534991 831 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms