Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 MIR326-201ENST00000362220 95 ntBASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 FAM86HP-204ENST00000513466 959 ntBASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 RN7SL48P-201ENST00000579283 293 ntBASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 MIR4741-201ENST00000579822 90 ntBASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLDND2Q8NHS1 AL354989.2-201ENST00000435838 1540 ntBASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 KRT8P14-201ENST00000414254 1442 ntBASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 AC020907.1-201ENST00000616460 1350 ntBASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 CD8B2-202ENST00000417670 633 ntBASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 Z93015.1-201ENST00000451718 390 ntBASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 AC099548.2-209ENST00000480264 625 ntBASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 AC243960.2-201ENST00000600996 747 ntBASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 AL645728.2-202ENST00000641679 227 ntBASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDND2Q8NHS1 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms