Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 SPDYE17-201ENST00000412399 783 ntBASIC12.94□□□□□ -0.34
BEST4Q8NFU0 MED15P5-201ENST00000423150 992 ntBASIC12.94□□□□□ -0.34
BEST4Q8NFU0 AL592309.1-201ENST00000443127 649 ntBASIC12.94□□□□□ -0.34
BEST4Q8NFU0 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 AC009078.2-202ENST00000463353 338 ntBASIC12.94□□□□□ -0.34
BEST4Q8NFU0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 SLED1-202ENST00000512051 380 ntBASIC12.94□□□□□ -0.34
BEST4Q8NFU0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
BEST4Q8NFU0 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 AC012617.1-204ENST00000586340 2305 ntBASIC12.93□□□□□ -0.34
BEST4Q8NFU0 AC068760.1-201ENST00000493579 1953 ntBASIC12.93□□□□□ -0.34
BEST4Q8NFU0 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 AL133267.1-201ENST00000398220 340 ntBASIC12.93□□□□□ -0.34
BEST4Q8NFU0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 AC069335.1-201ENST00000489972 472 ntBASIC12.93□□□□□ -0.34
BEST4Q8NFU0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 AC140113.2-201ENST00000604370 208 ntBASIC12.93□□□□□ -0.34
BEST4Q8NFU0 AC027601.4-201ENST00000611259 610 ntBASIC12.93□□□□□ -0.34
BEST4Q8NFU0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BEST4Q8NFU0 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms