Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 CLUHP2-201ENST00000426660 1303 ntBASIC13.95□□□□□ -0.18
NUP43Q8NFH3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 POM121L8P-201ENST00000417732 1281 ntBASIC13.95□□□□□ -0.18
NUP43Q8NFH3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 POM121L9P-203ENST00000441984 1285 ntBASIC13.95□□□□□ -0.18
NUP43Q8NFH3 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 AC007389.4-201ENST00000454674 793 ntBASIC13.95□□□□□ -0.18
NUP43Q8NFH3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 AC106760.1-201ENST00000508690 800 ntBASIC13.95□□□□□ -0.18
NUP43Q8NFH3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 RN7SL48P-201ENST00000579283 293 ntBASIC13.95□□□□□ -0.18
NUP43Q8NFH3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
NUP43Q8NFH3 AL138709.1-201ENST00000614840 1693 ntBASIC13.95□□□□□ -0.18
NUP43Q8NFH3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 MRPL37P1-201ENST00000592451 1337 ntBASIC13.94□□□□□ -0.18
NUP43Q8NFH3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 RN7SKP230-201ENST00000365642 335 ntBASIC13.94□□□□□ -0.18
NUP43Q8NFH3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 RN7SL692P-201ENST00000464677 288 ntBASIC13.94□□□□□ -0.18
NUP43Q8NFH3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 AP001889.1-201ENST00000525414 633 ntBASIC13.94□□□□□ -0.18
NUP43Q8NFH3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 AC117489.1-201ENST00000625169 3217 ntBASIC13.94□□□□□ -0.18
NUP43Q8NFH3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
NUP43Q8NFH3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms