Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ZNF248Q8NDW4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 AL136379.1-201ENST00000623471 2642 ntBASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 PUDPP3-201ENST00000445368 636 ntBASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 NPM1P43-201ENST00000558669 786 ntBASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 MIR4313-201ENST00000580760 101 ntBASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 AC092127.1-201ENST00000567093 3455 ntBASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF248Q8NDW4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 SSR4P1-203ENST00000599569 2260 ntBASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 RN7SKP214-201ENST00000364208 315 ntBASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 AC103988.2-201ENST00000561804 725 ntBASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 AC100827.2-201ENST00000563214 1194 ntBASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 AC005324.6-201ENST00000587972 613 ntBASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 AC138466.3-201ENST00000619983 221 ntBASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF248Q8NDW4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms