Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 CICP12-201ENST00000455801 843 ntBASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 MIR4783-201ENST00000580343 82 ntBASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 EEF1DP1-201ENST00000585891 896 ntBASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 AC010328.2-201ENST00000597698 1111 ntBASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 SHC1P1-201ENST00000425230 1745 ntBASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 KHSRPP1-201ENST00000427983 1768 ntBASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 MYADML-201ENST00000474610 2147 ntBASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZIC4Q8N9L1 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 AC244157.2-201ENST00000616239 1006 ntBASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 AC027601.3-201ENST00000622907 509 ntBASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 AC015802.1-201ENST00000588104 1449 ntBASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
ZIC4Q8N9L1 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms