Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
RP1L1Q8IWN7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RP1L1Q8IWN7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RP1L1Q8IWN7 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RP1L1Q8IWN7 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RP1L1Q8IWN7 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.52□□□□□ -0.24
RP1L1Q8IWN7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.52□□□□□ -0.24
RP1L1Q8IWN7 TUBB8P8-201ENST00000458717 1058 ntBASIC13.52□□□□□ -0.24
RP1L1Q8IWN7 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RP1L1Q8IWN7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.52□□□□□ -0.24
RP1L1Q8IWN7 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.52□□□□□ -0.24
RP1L1Q8IWN7 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
RP1L1Q8IWN7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RP1L1Q8IWN7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RP1L1Q8IWN7 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RP1L1Q8IWN7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.52□□□□□ -0.24
RP1L1Q8IWN7 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RP1L1Q8IWN7 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 RPL13AP19-201ENST00000434320 584 ntBASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 AC106820.3-201ENST00000561653 397 ntBASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.52□□□□□ -0.25
RP1L1Q8IWN7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 MIR6756-201ENST00000616240 63 ntBASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 AL603764.1-201ENST00000636452 321 ntBASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RP1L1Q8IWN7 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms